2dj6: Difference between revisions

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OCA

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-[[Image:2dj6.gif|left|200px]]
-<!--
+==Crystal structure of 6-pyruvoyl tetrahydrobiopterin synthase from Pyrococcus horikoshii OT3==
-The line below this paragraph, containing "STRUCTURE_2dj6", creates the "Structure Box" on the page.
+<StructureSection load='2dj6' size='340' side='right'caption='[[2dj6]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2dj6]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DJ6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DJ6 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dj6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dj6 OCA], [https://pdbe.org/2dj6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dj6 RCSB], [https://www.ebi.ac.uk/pdbsum/2dj6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dj6 ProSAT], [https://www.topsan.org/Proteins/RSGI/2dj6 TOPSAN]</span></td></tr>
-{{STRUCTURE_2dj6|  PDB=2dj6  |  SCENE=  }}
+</table>
+== Function ==
-'''Crystal structure of 6-pyruvoyl tetrahydrobiopterin synthase from Pyrococcus horikoshii OT3'''
+[https://www.uniprot.org/uniprot/O58368_PYRHO O58368_PYRHO]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
-==About this Structure==
+Check<jmol>
-DJ6 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DJ6 OCA].
+  <jmolCheckbox>
-[[Category: 6-pyruvoyltetrahydropterin synthase]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dj/2dj6_consurf.spt"</scriptWhenChecked>
-[[Category: Pyrococcus horikoshii]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: Single protein]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Bagautdinov, B.]]
+  </jmolCheckbox>
-[[Category: Kunishima, N.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dj6 ConSurf].
-[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+<div style="clear:both"></div>
-[[Category: National project on protein structural and functional analyse]]
+__TOC__
-[[Category: Nppsfa]]
+</StructureSection>
-[[Category: Riken structural genomics/proteomics initiative]]
+[[Category: Large Structures]]
-[[Category: Rsgi]]
+[[Category: Pyrococcus horikoshii OT3]]
-[[Category: Structural genomic]]
+[[Category: Bagautdinov B]]
-[[Category: X-ray diffraction]]
+[[Category: Kunishima N]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 00:32:07 2008''