2f5h: Difference between revisions

New page: left|200px<br /> <applet load="2f5h" size="450" color="white" frame="true" align="right" spinBox="true" caption="2f5h" /> '''Solution structure of the alpha-domain of h...
 
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'''Solution structure of the alpha-domain of human Metallothionein-3'''<br />


==Overview==
==Solution structure of the alpha-domain of human Metallothionein-3==
Alzheimer's disease is characterized by progressive loss of neurons, accompanied by the formation of intraneural neurofibrillary tangles and, extracellular amyloid plaques. Human neuronal growth inhibitory factor, classified as metallothionein-3 (MT-3), was found to be related to the, neurotrophic activity promoting cortical neuron survival and dendrite, outgrowth in the cell culture studies. We have determined the solution, structure of the alpha-domain of human MT-3 (residues 32-68) by, multinuclear and multidimensional NMR spectroscopy in combination with the, molecular dynamic simulated annealing approach. The human MT-3 shows two, metal-thiolate clusters, one in the N-terminus (beta-domain) and one in, the C-terminus (alpha-domain). The overall fold of the alpha-domain is, similar to that of mouse MT-3. However, human MT-3 has a longer loop in, the acidic hexapeptide insertion than that of mouse MT-3. Surprisingly, the backbone dynamics of the protein revealed that the beta-domain, exhibits similar internal motion to the alpha-domain, although the, N-terminal residues are more flexible. Our results may provide useful, information for understanding the structure-function relationship of human, MT-3.
<StructureSection load='2f5h' size='340' side='right'caption='[[2f5h]]' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[2f5h]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F5H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2F5H FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2f5h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2f5h OCA], [https://pdbe.org/2f5h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2f5h RCSB], [https://www.ebi.ac.uk/pdbsum/2f5h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2f5h ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/MT3_HUMAN MT3_HUMAN] Binds heavy metals. Contains three zinc and three copper atoms per polypeptide chain and only a negligible amount of cadmium. Inhibits survival and neurite formation of cortical neurons in vitro.
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Alzheimer's disease is characterized by progressive loss of neurons accompanied by the formation of intraneural neurofibrillary tangles and extracellular amyloid plaques. Human neuronal growth inhibitory factor, classified as metallothionein-3 (MT-3), was found to be related to the neurotrophic activity promoting cortical neuron survival and dendrite outgrowth in the cell culture studies. We have determined the solution structure of the alpha-domain of human MT-3 (residues 32-68) by multinuclear and multidimensional NMR spectroscopy in combination with the molecular dynamic simulated annealing approach. The human MT-3 shows two metal-thiolate clusters, one in the N-terminus (beta-domain) and one in the C-terminus (alpha-domain). The overall fold of the alpha-domain is similar to that of mouse MT-3. However, human MT-3 has a longer loop in the acidic hexapeptide insertion than that of mouse MT-3. Surprisingly, the backbone dynamics of the protein revealed that the beta-domain exhibits similar internal motion to the alpha-domain, although the N-terminal residues are more flexible. Our results may provide useful information for understanding the structure-function relationship of human MT-3.


==About this Structure==
Solution structure and dynamics of human metallothionein-3 (MT-3).,Wang H, Zhang Q, Cai B, Li H, Sze KH, Huang ZX, Wu HM, Sun H FEBS Lett. 2006 Feb 6;580(3):795-800. Epub 2006 Jan 9. PMID:16413543<ref>PMID:16413543</ref>
2F5H is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with CD as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2F5H OCA].


==Reference==
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
Solution structure and dynamics of human metallothionein-3 (MT-3)., Wang H, Zhang Q, Cai B, Li H, Sze KH, Huang ZX, Wu HM, Sun H, FEBS Lett. 2006 Feb 6;580(3):795-800. Epub 2006 Jan 9. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=16413543 16413543]
</div>
<div class="pdbe-citations 2f5h" style="background-color:#fffaf0;"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Cai, B.]]
[[Category: Cai B]]
[[Category: Huang, Z.X.]]
[[Category: Huang ZX]]
[[Category: Li, H.Y.]]
[[Category: Li HY]]
[[Category: Sun, H.Z.]]
[[Category: Sun HZ]]
[[Category: Sze, K.H.]]
[[Category: Sze KH]]
[[Category: Wang, H.]]
[[Category: Wang H]]
[[Category: Wu, H.M.]]
[[Category: Wu HM]]
[[Category: Zhang, Q.]]
[[Category: Zhang Q]]
[[Category: CD]]
[[Category: alpha helix]]
[[Category: cadmium-thiolate cluster]]
 
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