1ved: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-[[Image:1ved.jpg|left|200px]]
-<!--
+==The crystal structure of the orthorhombic form of hen egg white lysozyme at 1.9 angstroms resolution in space==
-The line below this paragraph, containing "STRUCTURE_1ved", creates the "Structure Box" on the page.
+<StructureSection load='1ved' size='340' side='right'caption='[[1ved]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1ved]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VED OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VED FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ved FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ved OCA], [https://pdbe.org/1ved PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ved RCSB], [https://www.ebi.ac.uk/pdbsum/1ved PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ved ProSAT]</span></td></tr>
-{{STRUCTURE_1ved|  PDB=1ved  |  SCENE=  }}
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ve/1ved_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ved ConSurf].
+<div style="clear:both"></div>
-'''The crystal structure of the orthorhombic form of hen egg white lysozyme at 1.9 angstroms resolution in space'''
+==See Also==
+*[[Lysozyme 3D structures|Lysozyme 3D structures]]
+== References ==
-==About this Structure==
+<references/>
-VED is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VED OCA].
+__TOC__
+</StructureSection>
 [[Category: Gallus gallus]]
-[[Category: Lysozyme]]
+[[Category: Large Structures]]
-[[Category: Single protein]]
+[[Category: Aibara S]]
-[[Category: Aibara, S.]]
+[[Category: DeLucas LJ]]
-[[Category: DeLucas, L J.]]
+[[Category: Hirose M]]
-[[Category: Hirose, M.]]
+[[Category: Kidera A]]
-[[Category: Kidera, A.]]
+[[Category: Shibata K]]
-[[Category: Shibata, K.]]
+[[Category: Suzuki A]]
-[[Category: Suzuki, A.]]
+[[Category: Yamane T]]
-[[Category: Yamane, T.]]
-[[Category: Hen egg white]]
-[[Category: Lysozyme]]
-[[Category: Microgravity]]
-[[Category: Orthrhombic]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 12:26:30 2008''