1srj: Difference between revisions

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-[[Image:1srj.gif|left|200px]]
-<!--
+==STRUCTURE-BASED DESIGN OF SYNTHETIC AZOBENZENE LIGANDS FOR STREPTAVIDIN==
-The line below this paragraph, containing "STRUCTURE_1srj", creates the "Structure Box" on the page.
+<StructureSection load='1srj' size='340' side='right'caption='[[1srj]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1srj]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_avidinii Streptomyces avidinii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SRJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SRJ FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAB:2-((4-HYDROXYNAPHTHYL)-AZO)BENZOIC+ACID'>NAB</scene></td></tr>
-{{STRUCTURE_1srj|  PDB=1srj  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1srj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1srj OCA], [https://pdbe.org/1srj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1srj RCSB], [https://www.ebi.ac.uk/pdbsum/1srj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1srj ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/SAV_STRAV SAV_STRAV] The biological function of streptavidin is not known. Forms a strong non-covalent specific complex with biotin (one molecule of biotin per subunit of streptavidin).
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sr/1srj_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1srj ConSurf].
+<div style="clear:both"></div>
-'''STRUCTURE-BASED DESIGN OF SYNTHETIC AZOBENZENE LIGANDS FOR STREPTAVIDIN'''
+==See Also==
+*[[Avidin 3D structures|Avidin 3D structures]]
+__TOC__
-==About this Structure==
+</StructureSection>
-SRJ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptomyces_avidinii Streptomyces avidinii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SRJ OCA].
+[[Category: Large Structures]]
-[[Category: Single protein]]
 [[Category: Streptomyces avidinii]]
-[[Category: Salemme, F R.]]
+[[Category: Salemme FR]]
-[[Category: Weber, P C.]]
+[[Category: Weber PC]]
-[[Category: Biotin-binding protein]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 09:03:44 2008''