1q4r: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(10 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:1q4r.jpg|left|200px]]


<!--
==Gene Product of At3g17210 from Arabidopsis Thaliana==
The line below this paragraph, containing "STRUCTURE_1q4r", creates the "Structure Box" on the page.
<StructureSection load='1q4r' size='340' side='right'caption='[[1q4r]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1q4r]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q4R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Q4R FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_1q4r|  PDB=1q4r  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1q4r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1q4r OCA], [https://pdbe.org/1q4r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1q4r RCSB], [https://www.ebi.ac.uk/pdbsum/1q4r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1q4r ProSAT], [https://www.topsan.org/Proteins/CESG/1q4r TOPSAN]</span></td></tr>
 
</table>
'''Gene Product of At3g17210 from Arabidopsis Thaliana'''
== Function ==
 
[https://www.uniprot.org/uniprot/POP3_ARATH POP3_ARATH]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
1Q4R is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q4R OCA].  
Check<jmol>
 
  <jmolCheckbox>
==Reference==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/q4/1q4r_consurf.spt"</scriptWhenChecked>
Crystal structure of the protein from gene At3g17210 of Arabidopsis thaliana., Bingman CA, Johnson KA, Peterson FC, Frederick RO, Zhao Q, Thao S, Fox BG, Volkman BF, Jeon WB, Smith DW, Newman CS, Ulrich EL, Hegeman A, Sussman MR, Markley JL, Phillips GN Jr, Proteins. 2004 Oct 1;57(1):218-20. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15326607 15326607]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Arabidopsis thaliana]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Single protein]]
  </jmolCheckbox>
[[Category: Bingman, C A.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1q4r ConSurf].
[[Category: CESG, Center for Eukaryotic Structural Genomics.]]
<div style="clear:both"></div>
[[Category: Johnson, K A.]]
__TOC__
[[Category: Jr., G N.Phillips.]]
</StructureSection>
[[Category: Smith, D W.]]
[[Category: Arabidopsis thaliana]]
[[Category: Arabidopsis thaliana]]
[[Category: Center for eukaryotic structural genomic]]
[[Category: Large Structures]]
[[Category: Cesg]]
[[Category: Bingman CA]]
[[Category: Protein structure initiative]]
[[Category: Johnson KA]]
[[Category: Structural genomic]]
[[Category: Phillips Jr GN]]
[[Category: Unknown function]]
[[Category: Smith DW]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 05:51:54 2008''

Latest revision as of 07:49, 17 October 2024

Gene Product of At3g17210 from Arabidopsis ThalianaGene Product of At3g17210 from Arabidopsis Thaliana

Structural highlights

1q4r is a 1 chain structure with sequence from Arabidopsis thaliana. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.9Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

POP3_ARATH

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1q4r, resolution 1.90Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=1q4r&oldid=4191046"