8ur4: Difference between revisions

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New page: '''Unreleased structure''' The entry 8ur4 is ON HOLD Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCI...
 
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'''Unreleased structure'''


The entry 8ur4 is ON HOLD
==Crystal Structure of macrophage migration inhibitory factor (MIF) from Trichomonas vaginalis (I4122 form)==
<StructureSection load='8ur4' size='340' side='right'caption='[[8ur4]], [[Resolution|resolution]] 2.55&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[8ur4]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Trichomonas_vaginalis_G3 Trichomonas vaginalis G3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8UR4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8UR4 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.55&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8ur4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8ur4 OCA], [https://pdbe.org/8ur4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8ur4 RCSB], [https://www.ebi.ac.uk/pdbsum/8ur4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8ur4 ProSAT]</span></td></tr>
</table>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
The unicellular parasitic protozoan Trichomonas vaginalis causes trichomoniasis, the most prevalent nonviral sexually transmitted disease globally. T. vaginalis evades host immune responses by producing homologs of host proteins, including cytokines such as macrophage migration inhibitory factor. T. vaginalis macrophage migration inhibitory factor (TvMIF) helps to facilitate the survival of T. vaginalis during nutritional stress conditions, increases prostate cell proliferation and invasiveness, and induces inflammation-related cellular pathways, thus mimicking the ability of human MIF to increase inflammation and cell proliferation. The production, crystallization and three structures of N-terminally hexahistidine-tagged TvMIF reveal a prototypical MIF trimer with a topology similar to that of human homologs (hMIF-1 and hMIF-2). The N-terminal tag obscures the expected pyruvate-binding site. The similarity of TvMIF to its human homologs can be exploited for structure-based drug discovery.


Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Structures of Trichomonas vaginalis macrophage migratory inhibitory factor.,Srivastava A, Nair A, Dawson OCO, Gao R, Liu L, Craig JK, Battaile KP, Harmon EK, Barrett LK, Van Voorhis WC, Subramanian S, Myler PJ, Lovell S, Asojo OA, Darwiche R Acta Crystallogr F Struct Biol Commun. 2024 Dec 1;80(Pt 12):341-7. doi: , 10.1107/S2053230X24011105. PMID:39601418<ref>PMID:39601418</ref>


Description: Crystal Structure of macrophage migration inhibitory factor (MIF) from Trichomonas vaginalis (I4122 form)
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
[[Category: Unreleased Structures]]
</div>
[[Category: Seattle Structural Genomics Center For Infectious Disease, Seattle Structural Genomics Center For Infectious Disease (Ssgcid)]]
<div class="pdbe-citations 8ur4" style="background-color:#fffaf0;"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Trichomonas vaginalis G3]]
[[Category: Structural genomic]]

Latest revision as of 23:19, 11 December 2024

Crystal Structure of macrophage migration inhibitory factor (MIF) from Trichomonas vaginalis (I4122 form)Crystal Structure of macrophage migration inhibitory factor (MIF) from Trichomonas vaginalis (I4122 form)

Structural highlights

8ur4 is a 3 chain structure with sequence from Trichomonas vaginalis G3. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.55Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Publication Abstract from PubMed

The unicellular parasitic protozoan Trichomonas vaginalis causes trichomoniasis, the most prevalent nonviral sexually transmitted disease globally. T. vaginalis evades host immune responses by producing homologs of host proteins, including cytokines such as macrophage migration inhibitory factor. T. vaginalis macrophage migration inhibitory factor (TvMIF) helps to facilitate the survival of T. vaginalis during nutritional stress conditions, increases prostate cell proliferation and invasiveness, and induces inflammation-related cellular pathways, thus mimicking the ability of human MIF to increase inflammation and cell proliferation. The production, crystallization and three structures of N-terminally hexahistidine-tagged TvMIF reveal a prototypical MIF trimer with a topology similar to that of human homologs (hMIF-1 and hMIF-2). The N-terminal tag obscures the expected pyruvate-binding site. The similarity of TvMIF to its human homologs can be exploited for structure-based drug discovery.

Structures of Trichomonas vaginalis macrophage migratory inhibitory factor.,Srivastava A, Nair A, Dawson OCO, Gao R, Liu L, Craig JK, Battaile KP, Harmon EK, Barrett LK, Van Voorhis WC, Subramanian S, Myler PJ, Lovell S, Asojo OA, Darwiche R Acta Crystallogr F Struct Biol Commun. 2024 Dec 1;80(Pt 12):341-7. doi: , 10.1107/S2053230X24011105. PMID:39601418[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Srivastava A, Nair A, Dawson OCO, Gao R, Liu L, Craig JK, Battaile KP, Harmon EK, Barrett LK, Van Voorhis WC, Subramanian S, Myler PJ, Lovell S, Asojo OA, Darwiche R. Structures of Trichomonas vaginalis macrophage migratory inhibitory factor. Acta Crystallogr F Struct Biol Commun. 2024 Dec 1;80(Pt 12):341-7. PMID:39601418 doi:10.1107/S2053230X24011105

8ur4, resolution 2.55Å

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