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Template:STRUCTURE 1lcd: Difference between revisions

New page: {{Structure |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1lcd (<scene name='initialview01'>initial scene</scene>) |SITE= |LIGAND= <scene name='pdbligand=DA:2'-DEOXYADENOSINE-5&...
 
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{{Structure
{{Structure
|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1lcd (<scene name='initialview01'>initial scene</scene>)
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1lcd]], [[NMR_Ensembles_of_Models | 3 NMR models]] (<scene name='initialview01'>default scene</scene>)}}}
|SITE=
|LIGAND= <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>
|LIGAND= <scene name='pdbligand=DA:2&#39;-DEOXYADENOSINE-5&#39;-MONOPHOSPHATE'>DA</scene>, <scene name='pdbligand=DC:2&#39;-DEOXYCYTIDINE-5&#39;-MONOPHOSPHATE'>DC</scene>, <scene name='pdbligand=DG:2&#39;-DEOXYGUANOSINE-5&#39;-MONOPHOSPHATE'>DG</scene>, <scene name='pdbligand=DT:THYMIDINE-5&#39;-MONOPHOSPHATE'>DT</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>
|ACTIVITY=
|GENE=
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=smart00354 HTH_LACI]</span>
|RELATEDENTRY=[[1lcc|1lcc]]
|RELATEDENTRY=[[1lcc|1lcc]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lcd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lcd OCA], [http://www.ebi.ac.uk/pdbsum/1lcd PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1lcd RCSB]</span>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lcd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lcd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1lcd RCSB], [http://www.ebi.ac.uk/pdbsum/1lcd PDBsum]</span>
|FUNCTION={{GO|id=GO:0003700 | text = transcription factor activity}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0005515 | text = protein binding}}
|PROCESS={{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}}{{GO|id=GO:0006350 | text = transcription}}
|COMPONENT={{GO|id=GO:0005622 | text = intracellular}}
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lcdA00 1Lcda00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001761 Ipr001761], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000843 Ipr000843], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010982 Ipr010982]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00356 PF00356]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=17111 d1lcda_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P03023 P03023]</span>
|uPDB=1LCD|CONSURF={{!}}-
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
{{!}} '''Toggle Conservation Colors:'''
{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
Rows = identical sequences:
<jmol>
<jmolButton>
<script></script>
<text>B [x]</text>
<name>jmb_1lcd_B</name>
<title>toggle chain B</title>
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
</jmolButton>
</jmol>
 
<jmol>
<jmolButton>
<script></script>
<text>C [x]</text>
<name>jmb_1lcd_C</name>
<title>toggle chain C</title>
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
</jmolButton>
</jmol>
 
<jmol>
<jmolButton>
<script></script>
<text>A [x]</text>
<name>jmb_1lcd_A</name>
<title>toggle chain A</title>
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
</jmolButton>
</jmol>
 
}}
}}
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