1km7: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:1km7.gif|left|200px]]<br />
-<applet load="1km7" size="450" color="white" frame="true" align="right" spinBox="true"
-caption="1km7" />
-'''Solution Structure and Backbone Dynamics of GABARAP, GABAA Receptor Associated Protein'''<br />
-==About this Structure==
+==Solution Structure and Backbone Dynamics of GABARAP, GABAA Receptor Associated Protein==
-KM7 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1KM7 OCA].
+<StructureSection load='1km7' size='340' side='right'caption='[[1km7]]' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1km7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KM7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KM7 FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1km7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1km7 OCA], [https://pdbe.org/1km7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1km7 RCSB], [https://www.ebi.ac.uk/pdbsum/1km7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1km7 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/GBRAP_HUMAN GBRAP_HUMAN] May play a role in intracellular transport of GABA(A) receptors and its interaction with the cytoskeleton. Involved in apoptosis. Involved in autophagy (By similarity).<ref>PMID:15977068</ref>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/km/1km7_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1km7 ConSurf].
+<div style="clear:both"></div>
-==Reference==
+==See Also==
-H, 13C and '5N resonance assignments of GABARAP, GABAA receptor associated protein., Kouno T, Miura K, Kanematsu T, Shirakawa M, Hirata M, Kawano K, J Biomol NMR. 2002 Jan;22(1):97-8. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=11885988 11885988]
+*[[GABA receptor-associated protein 3D structures|GABA receptor-associated protein 3D structures]]
+== References ==
+<references/>
+__TOC__
+</StructureSection>
 [[Category: Homo sapiens]]
-[[Category: Single protein]]
+[[Category: Large Structures]]
-[[Category: Hirata, M.]]
+[[Category: Hirata M]]
-[[Category: Kanematsu, T.]]
+[[Category: Kanematsu T]]
-[[Category: Kawano, K.]]
+[[Category: Kawano K]]
-[[Category: Kouno, T.]]
+[[Category: Kouno T]]
-[[Category: Miura, K.]]
+[[Category: Miura K]]
-[[Category: Shirakawa, M.]]
+[[Category: Shirakawa M]]
-[[Category: Tada, M.]]
+[[Category: Tada M]]
-[[Category: Tate, S.]]
+[[Category: Tate S]]
-[[Category: ubiquitin-like fold]]
-''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Nov 12 17:52:17 2007''