8h6d: Difference between revisions
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== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[8h6d]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8H6D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8H6D FirstGlance]. <br> | <table><tr><td colspan='2'>[[8h6d]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8H6D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8H6D FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GRA:GLUTARYL-COENZYME+A'>GRA</scene></td></tr> | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.26Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GRA:GLUTARYL-COENZYME+A'>GRA</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8h6d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8h6d OCA], [https://pdbe.org/8h6d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8h6d RCSB], [https://www.ebi.ac.uk/pdbsum/8h6d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8h6d ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8h6d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8h6d OCA], [https://pdbe.org/8h6d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8h6d RCSB], [https://www.ebi.ac.uk/pdbsum/8h6d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8h6d ProSAT]</span></td></tr> | ||
</table> | </table> | ||
Latest revision as of 13:34, 25 October 2023
Crystal structure of human GCN5 histone acetyltransferase domain bound with glutaryl-CoACrystal structure of human GCN5 histone acetyltransferase domain bound with glutaryl-CoA
Structural highlights
FunctionKAT2A_HUMAN Functions as a histone acetyltransferase (HAT) to promote transcriptional activation. Acetylation of histones gives a specific tag for epigenetic transcription activation. Has significant histone acetyltransferase activity with core histones, but not with nucleosome core particles. Also acetylates non-histone proteins, such as CEBPB (PubMed:17301242). Component of the ATAC complex, a complex with histone acetyltransferase activity on histones H3 and H4. In case of HIV-1 infection, it is recruited by the viral protein Tat. Regulates Tat's transactivating activity and may help inducing chromatin remodeling of proviral genes.[1] [2] Publication Abstract from PubMedEmerging discoveries about undocumented acyltransferase activities of known histone acetyltransferases (HATs) advance our understandings in the regulation of histone modifications. However, the molecular basis of HATs selecting acyl coenzyme A (acyl-CoA) substrates for histone modification is less known. We here report that lysine acetyltransferase 2A (KAT2A) as an illustrative instance of HATs can selectively utilize acetyl-CoA, propionyl-CoA, butyryl-CoA, and succinyl-CoA to directly deposit 18 histone acylation hallmarks in nucleosome. By analyzing the co-crystal structures of the catalytic domain of KAT2A in complex with acetyl-CoA, propionyl-CoA, butyryl-CoA, malonyl-CoA, succinyl-CoA, and glutaryl-CoA, we conclude that the alternative substrate-binding pocket of KAT2A and the length and electrostatic features of the acyl chain cooperatively determine the selection of the acyl-CoA substrates by KAT2A. This study reveals the molecular basis underlying the pluripotency of HATs that selectively install acylation hallmarks in nucleosomes, which might serve as instrumental mechanism to precisely regulate histone acylation profiles in cells. Molecular Basis of KAT2A Selecting Acyl-CoA Cofactors for Histone Modifications.,Li S, Li N, He J, Zhou R, Lu Z, Tao YJ, Guo YR, Wang Y Research (Wash D C). 2023;6:0109. doi: 10.34133/research.0109. Epub 2023 Apr 4. PMID:37040526[3] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. References
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