8bdb: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
'''Unreleased structure'''


The entry 8bdb is ON HOLD  until Paper Publication
==Ribulose-1,5-bisphosphate carboxylase/oxygenase from Griffithsia monilis==
<StructureSection load='8bdb' size='340' side='right'caption='[[8bdb]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[8bdb]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Griffithsia_monilis Griffithsia monilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8BDB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8BDB FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCT:BICARBONATE+ION'>BCT</scene>, <scene name='pdbligand=CAP:2-CARBOXYARABINITOL-1,5-DIPHOSPHATE'>CAP</scene>, <scene name='pdbligand=CCS:CARBOXYMETHYLATED+CYSTEINE'>CCS</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HL2:(2S,3R)-2-AMINO-3-HYDROXY-4-METHYLPENTANOIC+ACID'>HL2</scene>, <scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8bdb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8bdb OCA], [https://pdbe.org/8bdb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8bdb RCSB], [https://www.ebi.ac.uk/pdbsum/8bdb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8bdb ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A7UM67_GRIMO A7UM67_GRIMO] RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.[HAMAP-Rule:MF_01338]


Authors: Andersson, I., Gunn, L.H.
==See Also==
 
*[[RuBisCO 3D structures|RuBisCO 3D structures]]
Description: Ribulose-1,5-bisphosphate carboxylase/oxygenase from Griffithsia monilis
__TOC__
[[Category: Unreleased Structures]]
</StructureSection>
[[Category: Andersson, I]]
[[Category: Griffithsia monilis]]
[[Category: Gunn, L.H]]
[[Category: Large Structures]]
[[Category: Andersson I]]
[[Category: Gunn LH]]

Latest revision as of 11:17, 7 February 2024

Ribulose-1,5-bisphosphate carboxylase/oxygenase from Griffithsia monilisRibulose-1,5-bisphosphate carboxylase/oxygenase from Griffithsia monilis

Structural highlights

8bdb is a 16 chain structure with sequence from Griffithsia monilis. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.7Å
Ligands:, , , , , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

A7UM67_GRIMO RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.[HAMAP-Rule:MF_01338]

See Also

8bdb, resolution 1.70Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA