Citric Acid Cycle: Difference between revisions

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*[[Krebs cycle overview]]
*[[Krebs cycle overview]]
*[[Krebs cycle reactions]]
*[[Krebs cycle reactions]]
*[[Major metabolic pathways converging on the citric acid cycle]]
*[[Citric acid cycle intermediates serve as substrates for biosynthetic processes]]
The [[Citric Acid Cycle]] (tricarboxylic acid cycle) is a series of enzyme catalyzed reactions which are critical in cellular respiration. Under oxidative conditions, pyruvate continues to be metabolized through the tricarboxylic acid cycle. In this cycle, Acetyl-CoA, a byproduct of [[glycolysis]], along with various cofactors, are broken down into carbon dioxide, water, and energy in the form of GTP and NADH.
The [[Citric Acid Cycle]] (tricarboxylic acid cycle) is a series of enzyme catalyzed reactions which are critical in cellular respiration. Under oxidative conditions, pyruvate continues to be metabolized through the tricarboxylic acid cycle. In this cycle, Acetyl-CoA, a byproduct of [[glycolysis]], along with various cofactors, are broken down into carbon dioxide, water, and energy in the form of GTP and NADH.


[[Pyruvate dehydrogenase]]
'''Pyruvate decarboxylation or pyruvate oxidation''', also known as the link reaction (or oxidative decarboxylation of pyruvate), is the conversion of <scene name='39/392339/Cv1/11'>pyruvate</scene> into <scene name='43/430893/Cv/2'>Acetyl-CoA</scene> by the enzyme complex pyruvate dehydrogenase complex (see [[Pyruvate dehydrogenase]]).


The multienzyme complex together catalyzes five distinct reactions in the conversion of pyruvate to acetyl-CoA. The overall result is described by the following reaction:  
The multienzyme complex together catalyzes five distinct reactions in the conversion of pyruvate to Acetyl-CoA. The overall result is described by the following reaction:  


Pyruvate + CoA + NAD+ ==> Acetyl-CoA + CO2 + NADH
Pyruvate + CoA + NAD+ ==> Acetyl-CoA + CO2 + NADH
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*Step 0 / 10 = [[Krebs cycle step 1]]
*Step 0 / 10 = [[Krebs cycle step 1]]
*[[ATP-citrate synthase]]
*[[ATP-citrate synthase]]
4C <scene name='43/430893/Cv/3'>oxaloacetate</scene> to a 6C molecule <scene name='43/430893/Cv/4'>citrate</scene>


'''Step 1 - Dehydration - Aconitase'''
'''Step 1 - Dehydration - Aconitase'''
* [[Aconitase]]
* [[Aconitase]]
*1st step of [[Krebs cycle step 2]]
*1st step of [[Krebs cycle step 2]]
6C Citrate => 6C <scene name='43/430893/Cv/5'>cis-Aconitate</scene>
'''Step 2 - Hydration - Aconitase'''
'''Step 2 - Hydration - Aconitase'''
* [[Aconitase]]
* [[Aconitase]]
*2nd step of [[Krebs cycle step 2]]
*2nd step of [[Krebs cycle step 2]]
 
6C ''cis''-Aconitate => 6C <scene name='43/430893/Cv/6'>Isocitrate</scene>
'''Step 3 - Oxidation - Isocitrate dehydrogenase'''
'''Step 3 - Oxidation - Isocitrate dehydrogenase'''
*[[Isocitrate dehydrogenase]]
*[[Isocitrate dehydrogenase]]
*1st step of [[Krebs cycle step 3]]
*1st step of [[Krebs cycle step 3]]
6C Isocitrate => 6C <scene name='43/430893/Cv/7'>Oxalosuccinate</scene>


'''Step 4 - Decarboxylation - Isocitrate dehydrogenase'''
'''Step 4 - Decarboxylation - Isocitrate dehydrogenase'''
*[[Isocitrate dehydrogenase]]
*[[Isocitrate dehydrogenase]]
*2nd step of [[Krebs cycle step 3]]
*2nd step of [[Krebs cycle step 3]]
6C Oxalosuccinate => 5C <scene name='43/430893/Cv/8'>α-Ketoglutarate</scene>
The α-ketoglutarate family of amino acid synthesis (synthesis of glutamate, glutamine, proline and arginine) begins with α-ketoglutarate, an intermediate in the Citric Acid Cycle. See [[Alpha-Ketoglutarates: glutamate, glutamine, proline, arginine]]


'''Step 5 - Oxidative decarboxylation - α-Ketoglutarate dehydrogenase (2-Oxoglutarate Dehydrogenase)'''
'''Step 5 - Oxidative decarboxylation - α-Ketoglutarate dehydrogenase (2-Oxoglutarate Dehydrogenase)'''
*[[2-Oxoglutarate Dehydrogenase]]
*[[2-Oxoglutarate Dehydrogenase]]
*Step 5 = [[Krebs cycle step 4]]  
*Step 5 = [[Krebs cycle step 4]]
5C α-Ketoglutarate => <scene name='43/430893/Cv/9'>Succinyl-CoA</scene> 4C chain (CoA excluded)


Articles in Proteopedia concerning [[Citric Acid Cycle]] include:
'''Step 6 - Substrate-level phosphorylation - Succinyl-CoA synthetase'''
* [[Citrate_Synthase|Citrate Synthase Structure & Mechanism]]
*[[Succinyl-CoA synthetase]]
* [[Aconitase]]
*Step 6 = [[Krebs cycle step 5]]
* [[Isocitrate dehydrogenase|Isocitrate Dehydrogenase]]
Succinyl-CoA => <scene name='43/430893/Cv/10'>Succinate</scene>
* [[2-Oxoglutarate Dehydrogenase]] (also known as alpha-ketoglutarate dehydrogenase)
 
* [[Succinyl-CoA synthetase|Succinyl-CoA Synthetase]]
The succinyl-CoA formed during [[Beta oxidation]] can also enter the Citric Acid Cycle in this step.
* [[Succinate Dehydrogenase]]
 
* [[Fumarase]]
'''Step 7 - Oxidation - Succinate dehydrogenase'''
* [[Malate dehydrogenase|Malate Dehydrogenase]]
*[[Succinate Dehydrogenase]]
* [[User:Cameron Evans/Sandbox 1|Glutamate Dehydrogenase]]
*Step 7 = [[Krebs cycle step 6]]
Succinate => <scene name='43/430893/Cv/11'>Fumarate</scene>
 
'''Step 8 - Hydration - Fumarase'''
*[[Fumarase]]
*Step 8 = [[Krebs cycle step 7]]  
Fumarate => <scene name='43/430893/Cv/12'>L-Malate</scene>
 
'''Step 9 - Oxidation - Malate dehydrogenase'''
*[[Malate dehydrogenase]]
*Step 9 = [[Krebs cycle step 8]]
L-Malate => <scene name='43/430893/Cv/3'>oxaloacetate</scene>


<br/>
Oxaloacetate takes part in [[gluconeogenesis]], the urea cycle, the glyoxylate cycle, amino acid synthesis ([[Oxaloacetate/aspartate: lysine, asparagine, methionine, threonine, and isoleucine]]), [[fatty acid synthesis]].


To view [[Citric Acid Cycle]] related proteins which are [[Proteopedia:Structure Index|Structure Index]] entries see:
'''Step 10 / 0 - Aldol condensation - Citrate synthase'''
* [[Aconitase#Available_3D_structures_of_Aconitase|Aconitase]]
*[[Citrate Synthase]]
<br />
*Step 10 / 0 = [[Krebs cycle step 1]]
4C <scene name='43/430893/Cv/3'>oxaloacetate</scene> to a 6C molecule <scene name='43/430893/Cv/4'>citrate</scene>


To view automatically seeded indices concerning [[Citric Acid Cycle]] See:
To view automatically seeded indices concerning [[Citric Acid Cycle]] See:
*[[:Category:Citric acid cycle|Citric Acid Cycle]]
*[[:Category:Citric acid cycle|Citric Acid Cycle]]
<br />
<br />
See also:
*[[Biosynthesis of cholesterol]]
*[[Fatty acid synthesis]]
*[[Amino Acid Synthesis]]
</StructureSection>
</StructureSection>

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

David Canner, Ann Taylor, Jaime Prilusky, Wayne Decatur, Alexander Berchansky