3unv: Difference between revisions

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<StructureSection load='3unv' size='340' side='right'caption='[[3unv]], [[Resolution|resolution]] 1.54&Aring;' scene=''>
<StructureSection load='3unv' size='340' side='right'caption='[[3unv]], [[Resolution|resolution]] 1.54&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3unv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_milletiae"_kawakami_and_yoshida_1920 "bacillus milletiae" kawakami and yoshida 1920]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UNV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3UNV FirstGlance]. <br>
<table><tr><td colspan='2'>[[3unv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pantoea_agglomerans Pantoea agglomerans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UNV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3UNV FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PHE:PHENYLALANINE'>PHE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=SFE:(3S)-3-AMINO-3-PHENYLPROPANOIC+ACID'>SFE</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.54&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=KWS:{2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-METHYLIDENE-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>KWS</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=KWS:{2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-METHYLIDENE-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>KWS</scene>, <scene name='pdbligand=PHE:PHENYLALANINE'>PHE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=SFE:(3S)-3-AMINO-3-PHENYLPROPANOIC+ACID'>SFE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3unv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3unv OCA], [https://pdbe.org/3unv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3unv RCSB], [https://www.ebi.ac.uk/pdbsum/3unv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3unv ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3unv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3unv OCA], [https://pdbe.org/3unv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3unv RCSB], [https://www.ebi.ac.uk/pdbsum/3unv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3unv ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q84FL5_ENTAG Q84FL5_ENTAG]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bacillus milletiae kawakami and yoshida 1920]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Geiger, J]]
[[Category: Pantoea agglomerans]]
[[Category: Strom, S]]
[[Category: Geiger J]]
[[Category: Lyase]]
[[Category: Strom S]]
[[Category: Mio]]

Latest revision as of 12:07, 15 November 2023

Pantoea agglomerans Phenylalanine AminomutasePantoea agglomerans Phenylalanine Aminomutase

Structural highlights

3unv is a 2 chain structure with sequence from Pantoea agglomerans. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.54Å
Ligands:, , , , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q84FL5_ENTAG

Publication Abstract from PubMed

The structure of the title aminomutase was solved. The steric bulk of Phe 455 (green CPK structure) twists the phenylpropanoate ligand (green stick) by approximately 15 degrees about the C(beta) axis, which precludes a stronger bidentate salt bridge with Arg 323 (magenta structure). Instead, a weaker monodentate bridge may partially explain the different configuration of the product, relative to that obtained with an isoenzyme that forms a bidentate intermediate.

Insights into the Mechanistic Pathway of the Pantoea agglomerans Phenylalanine Aminomutase.,Strom S, Wanninayake U, Ratnayake ND, Walker KD, Geiger JH Angew Chem Int Ed Engl. 2012 Feb 8. doi: 10.1002/anie.201108525. PMID:22319000[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. ↑ Strom S, Wanninayake U, Ratnayake ND, Walker KD, Geiger JH. Insights into the Mechanistic Pathway of the Pantoea agglomerans Phenylalanine Aminomutase. Angew Chem Int Ed Engl. 2012 Feb 8. doi: 10.1002/anie.201108525. PMID:22319000 doi:http://dx.doi.org/10.1002/anie.201108525

3unv, resolution 1.54Å

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