7sb2: Difference between revisions

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<StructureSection load='7sb2' size='340' side='right'caption='[[7sb2]], [[Resolution|resolution]] 3.40&Aring;' scene=''>
<StructureSection load='7sb2' size='340' side='right'caption='[[7sb2]], [[Resolution|resolution]] 3.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[7sb2]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7SB2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7SB2 FirstGlance]. <br>
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7SB2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7SB2 FirstGlance]. <br>
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[7saz|7saz]]</div></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.4&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7sb2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7sb2 OCA], [https://pdbe.org/7sb2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7sb2 RCSB], [https://www.ebi.ac.uk/pdbsum/7sb2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7sb2 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7sb2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7sb2 OCA], [https://pdbe.org/7sb2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7sb2 RCSB], [https://www.ebi.ac.uk/pdbsum/7sb2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7sb2 ProSAT]</span></td></tr>
</table>
</table>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Gliding motility using cell surface adhesins, and export of proteins by the type IX secretion system (T9SS) are two phylum-specific features of the Bacteroidetes. Both of these processes are energized by the GldLM motor complex, which transduces the proton motive force at the inner membrane into mechanical work at the outer membrane. We previously used cryo-electron microscopy to solve the structure of the GldLM motor core from Flavobacterium johnsoniae at 3.9-A resolution (R. Hennell James, J. C. Deme, A. Kjaer, F. Alcock, et al., Nat Microbiol 6:221-233, 2021, https://dx.doi.org/10.1038/s41564-020-00823-6). Here, we present structures of homologous complexes from a range of pathogenic and environmental Bacteroidetes species at up to 3.0-A resolution. These structures show that the architecture of the GldLM motor core is conserved across the Bacteroidetes phylum, although there are species-specific differences at the N terminus of GldL. The resolution improvements reveal a cage-like structure that ties together the membrane-proximal cytoplasmic region of GldL and influences gliding function. These findings add detail to our structural understanding of bacterial ion-driven motors that drive the T9SS and gliding motility. IMPORTANCE Many bacteria in the Bacteroidetes phylum use the type IX secretion system to secrete proteins across their outer membrane. Most of these bacteria can also glide across surfaces using adhesin proteins that are propelled across the cell surface. Both secretion and gliding motility are driven by the GldLM protein complex, which forms a nanoscale electrochemical motor. We used cryo-electron microscopy to study the structure of the GldLM protein complex from different species, including the human pathogens Porphyromonas gingivalis and Capnocytophaga canimorsus. The organization of the motor is conserved across species, but we find species-specific structural differences and resolve motor features at higher resolution. This work improves our understanding of the type IX secretion system, which is a virulence determinant in human and animal diseases.
Structures of the Type IX Secretion/Gliding Motility Motor from across the Phylum Bacteroidetes.,Hennell James R, Deme JC, Hunter A, Berks BC, Lea SM mBio. 2022 Apr 21:e0026722. doi: 10.1128/mbio.00267-22. PMID:35446127<ref>PMID:35446127</ref>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 7sb2" style="background-color:#fffaf0;"></div>
== References ==
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Deme, J C]]
[[Category: Deme JC]]
[[Category: James, R Hennell]]
[[Category: Hennell James R]]
[[Category: Lea, S M]]
[[Category: Lea SM]]
[[Category: Motor protein]]
[[Category: Type ix secretion system]]

Latest revision as of 08:50, 5 June 2024

Structure of the periplasmic domain of GldM from Capnocytophaga canimorsusStructure of the periplasmic domain of GldM from Capnocytophaga canimorsus

Structural highlights

Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Electron Microscopy, Resolution 3.4Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

7sb2, resolution 3.40Å

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