1x5a: Difference between revisions

No edit summary
No edit summary
 
Line 1: Line 1:


==The solution structure of the second fibronectin type III domain of mouse Ephrin type-A receptor 1==
==The solution structure of the second fibronectin type III domain of mouse Ephrin type-A receptor 1==
<StructureSection load='1x5a' size='340' side='right'caption='[[1x5a]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
<StructureSection load='1x5a' size='340' side='right'caption='[[1x5a]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1x5a]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X5A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1X5A FirstGlance]. <br>
<table><tr><td colspan='2'>[[1x5a]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X5A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1X5A FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Epha1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Transferase Transferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.10.1 and 2.7.10.2 2.7.10.1 and 2.7.10.2] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1x5a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x5a OCA], [https://pdbe.org/1x5a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1x5a RCSB], [https://www.ebi.ac.uk/pdbsum/1x5a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1x5a ProSAT], [https://www.topsan.org/Proteins/RSGI/1x5a TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1x5a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x5a OCA], [https://pdbe.org/1x5a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1x5a RCSB], [https://www.ebi.ac.uk/pdbsum/1x5a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1x5a ProSAT], [https://www.topsan.org/Proteins/RSGI/1x5a TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/EPHA1_MOUSE EPHA1_MOUSE]] Receptor tyrosine kinase which binds promiscuously membrane-bound ephrin-A family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Binds with a low affinity EFNA3 and EFNA4 and with a high affinity to EFNA1 which most probably constitutes its cognate/functional ligand. Upon activation by EFNA1 induces cell attachment to the extracellular matrix inhibiting cell spreading and motility through regulation of ILK and downstream RHOA and RAC. Plays also a role in angiogenesis and regulates cell proliferation. May play a role in apoptosis.<ref>PMID:18802966</ref>
[https://www.uniprot.org/uniprot/EPHA1_MOUSE EPHA1_MOUSE] Receptor tyrosine kinase which binds promiscuously membrane-bound ephrin-A family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Binds with a low affinity EFNA3 and EFNA4 and with a high affinity to EFNA1 which most probably constitutes its cognate/functional ligand. Upon activation by EFNA1 induces cell attachment to the extracellular matrix inhibiting cell spreading and motility through regulation of ILK and downstream RHOA and RAC. Plays also a role in angiogenesis and regulates cell proliferation. May play a role in apoptosis.<ref>PMID:18802966</ref>  
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 28: Line 27:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Lk3 transgenic mice]]
[[Category: Mus musculus]]
[[Category: Transferase]]
[[Category: Inoue M]]
[[Category: Inoue, M]]
[[Category: Kigawa T]]
[[Category: Kigawa, T]]
[[Category: Koshiba S]]
[[Category: Koshiba, S]]
[[Category: Sasagawa A]]
[[Category: Structural genomic]]
[[Category: Tochio N]]
[[Category: Sasagawa, A]]
[[Category: Yokoyama S]]
[[Category: Tochio, N]]
[[Category: Yokoyama, S]]
[[Category: Esk]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Nppsfa]]
[[Category: Rsgi]]
[[Category: Tyrosine-protein kinase receptor]]
[[Category: Unknown function]]

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA