3a3e: Difference between revisions

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<StructureSection load='3a3e' size='340' side='right'caption='[[3a3e]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
<StructureSection load='3a3e' size='340' side='right'caption='[[3a3e]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3a3e]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacterium_influenzae"_lehmann_and_neumann_1896 "bacterium influenzae" lehmann and neumann 1896]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A3E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3A3E FirstGlance]. <br>
<table><tr><td colspan='2'>[[3a3e]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A3E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3A3E FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CMV:(2R,4S)-2-[(1R)-1-({(2R)-2-[(4-ETHYL-2,3-DIOXOPIPERAZIN-1-YL)AMINO]-2-PHENYLACETYL}AMINO)-2-OXOETHYL]-5,5-DIMETHYL-1,3-THIAZOLIDINE-4-CARBOXYLIC+ACID'>CMV</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3a3d|3a3d]], [[3a3f|3a3f]], [[3a3i|3a3i]], [[3a3j|3a3j]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CMV:(2R,4S)-2-[(1R)-1-({(2R)-2-[(4-ETHYL-2,3-DIOXOPIPERAZIN-1-YL)AMINO]-2-PHENYLACETYL}AMINO)-2-OXOETHYL]-5,5-DIMETHYL-1,3-THIAZOLIDINE-4-CARBOXYLIC+ACID'>CMV</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dacB ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=727 "Bacterium influenzae" Lehmann and Neumann 1896])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Serine-type_D-Ala-D-Ala_carboxypeptidase Serine-type D-Ala-D-Ala carboxypeptidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.16.4 3.4.16.4] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3a3e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a3e OCA], [https://pdbe.org/3a3e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3a3e RCSB], [https://www.ebi.ac.uk/pdbsum/3a3e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3a3e ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3a3e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a3e OCA], [https://pdbe.org/3a3e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3a3e RCSB], [https://www.ebi.ac.uk/pdbsum/3a3e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3a3e ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A8E0K8_HAEIF A8E0K8_HAEIF]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a3/3a3e_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a3/3a3e_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bacterium influenzae lehmann and neumann 1896]]
[[Category: Haemophilus influenzae]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Serine-type D-Ala-D-Ala carboxypeptidase]]
[[Category: Kawai F]]
[[Category: Kawai, F]]
[[Category: Park S-Y]]
[[Category: Park, S Y]]
[[Category: Roper DI]]
[[Category: Roper, D I]]
[[Category: Tame JRH]]
[[Category: Tame, J R.H]]
[[Category: Dacb]]
[[Category: Hydrolase]]
[[Category: Pbp4]]
[[Category: Penicillin binding protein 4]]

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