2xd9: Difference between revisions

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<StructureSection load='2xd9' size='340' side='right'caption='[[2xd9]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
<StructureSection load='2xd9' size='340' side='right'caption='[[2xd9]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2xd9]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_43504 Atcc 43504]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XD9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XD9 FirstGlance]. <br>
<table><tr><td colspan='2'>[[2xd9]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XD9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XD9 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=XD9:(4R,6R,7S)-4,6,7-TRIHYDROXY-2-[(1E)-PROP-1-EN-1-YL]-4,5,6,7-TETRAHYDRO-1-BENZOTHIOPHENE-4-CARBOXYLIC+ACID'>XD9</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2c57|2c57]], [[2wks|2wks]], [[2c4v|2c4v]], [[2xda|2xda]], [[2xb9|2xb9]], [[1j2y|1j2y]], [[2c4w|2c4w]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=XD9:(4R,6R,7S)-4,6,7-TRIHYDROXY-2-[(1E)-PROP-1-EN-1-YL]-4,5,6,7-TETRAHYDRO-1-BENZOTHIOPHENE-4-CARBOXYLIC+ACID'>XD9</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/3-dehydroquinate_dehydratase 3-dehydroquinate dehydratase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.10 4.2.1.10] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xd9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xd9 OCA], [https://pdbe.org/2xd9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xd9 RCSB], [https://www.ebi.ac.uk/pdbsum/2xd9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xd9 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xd9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xd9 OCA], [https://pdbe.org/2xd9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xd9 RCSB], [https://www.ebi.ac.uk/pdbsum/2xd9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xd9 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/AROQ_HELPY AROQ_HELPY]] Catalyzes a trans-dehydration via an enolate intermediate (By similarity).[HAMAP-Rule:MF_00169]  
[https://www.uniprot.org/uniprot/AROQ_HELPY AROQ_HELPY] Catalyzes a trans-dehydration via an enolate intermediate (By similarity).[HAMAP-Rule:MF_00169]


==See Also==
==See Also==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: 3-dehydroquinate dehydratase]]
[[Category: Helicobacter pylori]]
[[Category: Atcc 43504]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Castedo, L]]
[[Category: Castedo L]]
[[Category: Fox, G C]]
[[Category: Fox GC]]
[[Category: Gonzalez-Bello, C]]
[[Category: Gonzalez-Bello C]]
[[Category: Hawkins, A R]]
[[Category: Hawkins AR]]
[[Category: Lamb, H]]
[[Category: Lamb H]]
[[Category: Lapthorn, A J]]
[[Category: Lapthorn AJ]]
[[Category: Llamas-Saiz, A L]]
[[Category: Llamas-Saiz AL]]
[[Category: Otero, J M]]
[[Category: Otero JM]]
[[Category: Paz, S]]
[[Category: Paz S]]
[[Category: Raaij, M J.van]]
[[Category: Tizon L]]
[[Category: Tizon, L]]
[[Category: Van Raaij MJ]]
[[Category: Aromatic amino acid biosynthesis]]
[[Category: Lyase]]

Latest revision as of 13:38, 16 August 2023

STRUCTURE OF HELICOBACTER PYLORI TYPE II DEHYDROQUINASE IN COMPLEX WITH INHIBITOR COMPOUND (4R,6R,7S)-4,6,7-Trihydroxy-2-((E)-prop-1- enyl)-4,5,6,7-tetrahydrobenzo(b)thiophene-4-carboxylic acidSTRUCTURE OF HELICOBACTER PYLORI TYPE II DEHYDROQUINASE IN COMPLEX WITH INHIBITOR COMPOUND (4R,6R,7S)-4,6,7-Trihydroxy-2-((E)-prop-1- enyl)-4,5,6,7-tetrahydrobenzo(b)thiophene-4-carboxylic acid

Structural highlights

2xd9 is a 3 chain structure with sequence from Helicobacter pylori. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.95Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

AROQ_HELPY Catalyzes a trans-dehydration via an enolate intermediate (By similarity).[HAMAP-Rule:MF_00169]

See Also

2xd9, resolution 1.95Å

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