1zov: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 3: Line 3:
<StructureSection load='1zov' size='340' side='right'caption='[[1zov]], [[Resolution|resolution]] 1.86&Aring;' scene=''>
<StructureSection load='1zov' size='340' side='right'caption='[[1zov]], [[Resolution|resolution]] 1.86&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1zov]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_sp. Bacillus sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZOV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZOV FirstGlance]. <br>
<table><tr><td colspan='2'>[[1zov]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_sp._NS-129 Bacillus sp. NS-129]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZOV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZOV FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.86&#8491;</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Sarcosine_oxidase Sarcosine oxidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.5.3.1 1.5.3.1] </span></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zov FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zov OCA], [https://pdbe.org/1zov PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zov RCSB], [https://www.ebi.ac.uk/pdbsum/1zov PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zov ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zov FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zov OCA], [https://pdbe.org/1zov PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zov RCSB], [https://www.ebi.ac.uk/pdbsum/1zov PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zov ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/MSOX_BACSN MSOX_BACSN]] Catalyzes the oxidative demethylation of sarcosine (By similarity).  
[https://www.uniprot.org/uniprot/MSOX_BACSN MSOX_BACSN] Catalyzes the oxidative demethylation of sarcosine (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 15: Line 15:
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zo/1zov_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zo/1zov_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
Line 25: Line 25:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bacillus sp]]
[[Category: Bacillus sp. NS-129]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Sarcosine oxidase]]
[[Category: Hua M]]
[[Category: Hua, M]]
[[Category: Ichikawa T]]
[[Category: Ichikawa, T]]
[[Category: Ito K]]
[[Category: Ito, K]]
[[Category: Kamo M]]
[[Category: Kamo, M]]
[[Category: Koyama Y]]
[[Category: Koyama, Y]]
[[Category: Kubota K]]
[[Category: Kubota, K]]
[[Category: Nagata K]]
[[Category: Nagata, K]]
[[Category: Ohtsuka J]]
[[Category: Ohtsuka, J]]
[[Category: Okai M]]
[[Category: Okai, M]]
[[Category: Sasaki H]]
[[Category: Sasaki, H]]
[[Category: Tanokura M]]
[[Category: Tanokura, M]]
[[Category: Flavoprotein]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Nppsfa]]
[[Category: Oxidoreductase]]
[[Category: Structural genomic]]

Latest revision as of 10:45, 23 October 2024

Crystal Structure of Monomeric Sarcosine Oxidase from Bacillus sp. NS-129Crystal Structure of Monomeric Sarcosine Oxidase from Bacillus sp. NS-129

Structural highlights

1zov is a 2 chain structure with sequence from Bacillus sp. NS-129. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.86Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

MSOX_BACSN Catalyzes the oxidative demethylation of sarcosine (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1zov, resolution 1.86Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA