2dcl: Difference between revisions

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<StructureSection load='2dcl' size='340' side='right'caption='[[2dcl]], [[Resolution|resolution]] 2.28&Aring;' scene=''>
<StructureSection load='2dcl' size='340' side='right'caption='[[2dcl]], [[Resolution|resolution]] 2.28&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2dcl]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/'pyrococcus_shinkaii' 'pyrococcus shinkaii']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DCL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DCL FirstGlance]. <br>
<table><tr><td colspan='2'>[[2dcl]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DCL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DCL FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.28&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PH1503 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=53953 'Pyrococcus shinkaii'])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dcl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dcl OCA], [https://pdbe.org/2dcl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dcl RCSB], [https://www.ebi.ac.uk/pdbsum/2dcl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dcl ProSAT], [https://www.topsan.org/Proteins/RSGI/2dcl TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dcl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dcl OCA], [https://pdbe.org/2dcl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dcl RCSB], [https://www.ebi.ac.uk/pdbsum/2dcl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dcl ProSAT], [https://www.topsan.org/Proteins/RSGI/2dcl TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Y1503_PYRHO Y1503_PYRHO]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Pyrococcus shinkaii]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Bagautdinov, B]]
[[Category: Pyrococcus horikoshii]]
[[Category: Kunishima, N]]
[[Category: Bagautdinov B]]
[[Category: Structural genomic]]
[[Category: Kunishima N]]
[[Category: Hexamer]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Nppsfa]]
[[Category: Rsgi]]
[[Category: Unknown function]]

Latest revision as of 11:25, 25 October 2023

Structure of PH1503 protein from Pyrococcus Horikoshii OT3Structure of PH1503 protein from Pyrococcus Horikoshii OT3

Structural highlights

2dcl is a 3 chain structure with sequence from Pyrococcus horikoshii. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.28Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Y1503_PYRHO

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2dcl, resolution 2.28Å

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OCA