7fci: Difference between revisions

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New page: '''Unreleased structure''' The entry 7fci is ON HOLD Authors: Description: Category: Unreleased Structures
 
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'''Unreleased structure'''


The entry 7fci is ON HOLD
==human NTCP in complex with YN69083 Fab==
 
<StructureSection load='7fci' size='340' side='right'caption='[[7fci]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
Authors:  
== Structural highlights ==
 
<table><tr><td colspan='2'>[[7fci]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7FCI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7FCI FirstGlance]. <br>
Description:  
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7fci FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7fci OCA], [https://pdbe.org/7fci PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7fci RCSB], [https://www.ebi.ac.uk/pdbsum/7fci PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7fci ProSAT]</span></td></tr>
[[Category: Unreleased Structures]]
</table>
== Disease ==
[[https://www.uniprot.org/uniprot/NTCP_HUMAN NTCP_HUMAN]] The disease is caused by variants affecting the gene represented in this entry.
== Function ==
[[https://www.uniprot.org/uniprot/NTCP_HUMAN NTCP_HUMAN]] As a major transporter of conjugated bile salts from plasma into the hepatocyte, it has a key role in the enterohepatic circulation of bile salts necessary for the solubilization and absorption of dietary fat and fat-soluble vitamins. It exhibits broad substrate specificity and transports various non-bile acid organic compounds as well. It is strictly dependent on the extracellular presence of sodium. Able to transport taurocholate, cholate, and the non-bile acid estron sulfate (PubMed:14660639, PubMed:24867799).<ref>PMID:14660639</ref> <ref>PMID:24867799</ref>  (Microbial infection) Acts as a receptor for hepatitis B virus.<ref>PMID:23150796</ref>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Ishimoto N]]
[[Category: Iwamoto M]]
[[Category: Iwata S]]
[[Category: Jin Z]]
[[Category: Lee W]]
[[Category: Liu K]]
[[Category: Mizutani K]]
[[Category: Muramatsu M]]
[[Category: Nishizawa T]]
[[Category: Nomura N]]
[[Category: Ohki M]]
[[Category: Oshima M]]
[[Category: Park JH]]
[[Category: Park SY]]
[[Category: Shirouzu M]]
[[Category: Son D]]
[[Category: Tame JRH]]
[[Category: Uchikubo-Kamo T]]
[[Category: Uemura T]]
[[Category: Wakita T]]
[[Category: Watashi K]]
[[Category: Yoshida H]]
[[Category: Yun JH]]

Latest revision as of 09:21, 8 September 2022

human NTCP in complex with YN69083 Fabhuman NTCP in complex with YN69083 Fab

Structural highlights

7fci is a 3 chain structure with sequence from Homo sapiens and Mus musculus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Disease

[NTCP_HUMAN] The disease is caused by variants affecting the gene represented in this entry.

Function

[NTCP_HUMAN] As a major transporter of conjugated bile salts from plasma into the hepatocyte, it has a key role in the enterohepatic circulation of bile salts necessary for the solubilization and absorption of dietary fat and fat-soluble vitamins. It exhibits broad substrate specificity and transports various non-bile acid organic compounds as well. It is strictly dependent on the extracellular presence of sodium. Able to transport taurocholate, cholate, and the non-bile acid estron sulfate (PubMed:14660639, PubMed:24867799).[1] [2] (Microbial infection) Acts as a receptor for hepatitis B virus.[3]

References

  1. Ho RH, Leake BF, Roberts RL, Lee W, Kim RB. Ethnicity-dependent polymorphism in Na+-taurocholate cotransporting polypeptide (SLC10A1) reveals a domain critical for bile acid substrate recognition. J Biol Chem. 2004 Feb 20;279(8):7213-22. doi: 10.1074/jbc.M305782200. Epub 2003, Dec 2. PMID:14660639 doi:http://dx.doi.org/10.1074/jbc.M305782200
  2. Vaz FM, Paulusma CC, Huidekoper H, de Ru M, Lim C, Koster J, Ho-Mok K, Bootsma AH, Groen AK, Schaap FG, Oude Elferink RP, Waterham HR, Wanders RJ. Sodium taurocholate cotransporting polypeptide (SLC10A1) deficiency: conjugated hypercholanemia without a clear clinical phenotype. Hepatology. 2015 Jan;61(1):260-7. doi: 10.1002/hep.27240. Epub 2014 Aug 25. PMID:24867799 doi:http://dx.doi.org/10.1002/hep.27240
  3. Yan H, Zhong G, Xu G, He W, Jing Z, Gao Z, Huang Y, Qi Y, Peng B, Wang H, Fu L, Song M, Chen P, Gao W, Ren B, Sun Y, Cai T, Feng X, Sui J, Li W. Sodium taurocholate cotransporting polypeptide is a functional receptor for human hepatitis B and D virus. Elife. 2012 Nov 13;1:e00049. doi: 10.7554/eLife.00049. PMID:23150796 doi:http://dx.doi.org/10.7554/eLife.00049

7fci, resolution 3.30Å

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OCA