2pw6: Difference between revisions

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<StructureSection load='2pw6' size='340' side='right'caption='[[2pw6]], [[Resolution|resolution]] 2.27&Aring;' scene=''>
<StructureSection load='2pw6' size='340' side='right'caption='[[2pw6]], [[Resolution|resolution]] 2.27&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2pw6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PW6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PW6 FirstGlance]. <br>
<table><tr><td colspan='2'>[[2pw6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PW6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PW6 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.27&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ygiD, b3039, JW3007 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pw6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pw6 OCA], [https://pdbe.org/2pw6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pw6 RCSB], [https://www.ebi.ac.uk/pdbsum/2pw6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pw6 ProSAT], [https://www.topsan.org/Proteins/RSGI/2pw6 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pw6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pw6 OCA], [https://pdbe.org/2pw6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pw6 RCSB], [https://www.ebi.ac.uk/pdbsum/2pw6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pw6 ProSAT], [https://www.topsan.org/Proteins/RSGI/2pw6 TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/YGID_ECOLI YGID_ECOLI]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pw/2pw6_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pw/2pw6_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Ecoli]]
[[Category: Escherichia coli K-12]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Chen, L]]
[[Category: Chen L]]
[[Category: Ebihara, A]]
[[Category: Ebihara A]]
[[Category: Kuramitsu, S]]
[[Category: Kuramitsu S]]
[[Category: Li, Y]]
[[Category: Li Y]]
[[Category: Liu, Z J]]
[[Category: Liu ZJ]]
[[Category: Newton, M G]]
[[Category: Newton MG]]
[[Category: Structural genomic]]
[[Category: Rose JP]]
[[Category: Rose, J P]]
[[Category: Ruble J]]
[[Category: Ruble, J]]
[[Category: Shinkai A]]
[[Category: Shinkai, A]]
[[Category: Takagi Y]]
[[Category: Takagi, Y]]
[[Category: Wang B-C]]
[[Category: Wang, B C]]
[[Category: Yokayama S]]
[[Category: Yokayama, S]]
[[Category: Zhu J]]
[[Category: Zhu, J]]
[[Category: Jw3007]]
[[Category: Protein structure]]
[[Category: PSI, Protein structure initiative]]
[[Category: Riken and psi]]
[[Category: Rsgi]]
[[Category: Secsg]]
[[Category: Uncharacterized protein]]
[[Category: Unknown function]]

Latest revision as of 11:30, 30 October 2024

Crystal structure of uncharacterized protein JW3007 from Escherichia coli K12Crystal structure of uncharacterized protein JW3007 from Escherichia coli K12

Structural highlights

2pw6 is a 1 chain structure with sequence from Escherichia coli K-12. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.27Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

YGID_ECOLI

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2pw6, resolution 2.27Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA