2c35: Difference between revisions

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<StructureSection load='2c35' size='340' side='right'caption='[[2c35]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
<StructureSection load='2c35' size='340' side='right'caption='[[2c35]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2c35]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2C35 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2C35 FirstGlance]. <br>
<table><tr><td colspan='2'>[[2c35]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2C35 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2C35 FirstGlance]. <br>
</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/DNA-directed_RNA_polymerase DNA-directed RNA polymerase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.6 2.7.7.6] </span></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2c35 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c35 OCA], [https://pdbe.org/2c35 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2c35 RCSB], [https://www.ebi.ac.uk/pdbsum/2c35 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2c35 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2c35 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c35 OCA], [https://pdbe.org/2c35 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2c35 RCSB], [https://www.ebi.ac.uk/pdbsum/2c35 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2c35 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/RPB7_HUMAN RPB7_HUMAN]] DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. RPB7 is part of a subcomplex with RPB4 that binds to a pocket formed by RPB1, RPB2 and RPB6 at the base of the clamp element. The RBP4-RPB7 subcomplex seems to lock the clamp via RPB7 in the closed conformation thus preventing double stranded DNA to enter the active site cleft. The RPB4-RPB7 subcomplex binds single-stranded DNA and RNA (By similarity). Binds RNA.<ref>PMID:9852112</ref>
[https://www.uniprot.org/uniprot/RPB4_HUMAN RPB4_HUMAN] DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. RPB4 is part of a subcomplex with RPB7 that binds to a pocket formed by RPB1, RPB2 and RPB6 at the base of the clamp element. The RBP4-RPB7 subcomplex seems to lock the clamp via RPB7 in the closed conformation thus preventing double-stranded DNA to enter the active site cleft. The RPB4-RPB7 subcomplex binds single-stranded DNA and RNA (By similarity).<ref>PMID:9852112</ref>  
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
</StructureSection>
</StructureSection>
[[Category: DNA-directed RNA polymerase]]
[[Category: Homo sapiens]]
[[Category: Human]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Brick, P]]
[[Category: Brick P]]
[[Category: Cordell, S C]]
[[Category: Cordell SC]]
[[Category: Meka, H]]
[[Category: Meka H]]
[[Category: Onesti, S]]
[[Category: Onesti S]]
[[Category: Werner, F]]
[[Category: Werner F]]
[[Category: Nucleotidyltransferase]]
[[Category: Polymerase]]
[[Category: Rna polymerase ii]]
[[Category: Transcription]]
[[Category: Transferase]]

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