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Adenylate kinase 3D structures: Difference between revisions

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*ADK unliganded
*ADK unliganded


**[[2ar7]] - hADK 4 - human<br />
**[[7x7s]] - hADK 1 – human - NMR<br />
**[[7de3]] - hADK 1 (mutant)<br />
**[[2ar7]] - hADK 4 <br />
**[[3ndp]] - hADK 4 (mutant)<br />
**[[3ndp]] - hADK 4 (mutant)<br />
**[[3iij]], [[3iik]] – hADK 6<br />
**[[3iij]], [[3iik]] – hADK 6<br />
Line 25: Line 27:
**[[4pzl]] – ADK – ''Francisella tularensis''<br />
**[[4pzl]] – ADK – ''Francisella tularensis''<br />
**[[5ycd]] – ADK – ''Poecilia reticulata''<br />
**[[5ycd]] – ADK – ''Poecilia reticulata''<br />
**[[6pk5]] - MiADK – ''Methanotorris igneus''<br />
**[[7owh]] – CoADK – ''Candidatus odinarchaeota''<br />


*ADK mononucleotide complex
*ADK mononucleotide complex


**[[6zjd]] - hADK 3 +ATP<br />
**[[2bwj]] - hADK 5+AMP<br />
**[[2bwj]] - hADK 5+AMP<br />
**[[3iil]] – hADK 6 + MgADP-Pi<br />
**[[3iil]] – hADK 6 + MgADP-Pi<br />
Line 36: Line 41:
**[[2ak3]] - bADK+AMP<br />
**[[2ak3]] - bADK+AMP<br />
**[[1dvr]] - yADK (mutant)+ATP analog - yeast<br />
**[[1dvr]] - yADK (mutant)+ATP analog - yeast<br />
**[[1ank]] - EcADK+AMP+AMPPNP<br />
**[[2eck]], [[4jzk]] - EcADK+AMP+ADP<br />
**[[6f7u]] – EcADK + GCP<br />
**[[6f7u]] – EcADK + GCP<br />
**[[3sr0]] - AaADK+AMP+ADP + AlF4<br />
**[[7apu]], [[8crg]], [[8rj4]] – EcADK + ADP<br />
**[[8rj9]] – EcADK (mutant) + ADP<br />
**[[4cf7]], [[4jky]], [[4jl5]], [[4jl6]], [[4jl8]], [[4jla]], [[4jlb]], [[4jld]] – AaADK +ADP <br />
**[[4cf7]], [[4jky]], [[4jl5]], [[4jl6]], [[4jl8]], [[4jla]], [[4jlb]], [[4jld]] – AaADK +ADP <br />
**[[4jlo]], [[4jlp]] – AaADK (mutant) +ADP <br />
**[[4jlo]], [[4jlp]] – AaADK (mutant) +ADP <br />
Line 45: Line 49:
**[[2cdn]] - MtADK+ADP<br />
**[[2cdn]] - MtADK+ADP<br />
**[[1kht]] - ADK+AMP - ''Methanococcus voltae''<br />
**[[1kht]] - ADK+AMP - ''Methanococcus voltae''<br />
**[[1nks]] - ADK+AMP+ADP - ''Sulfolobus acidocaldarius''<br />
**[[6pjw]] - MiADK+AMP <br />
**[[4k46]] - ADK+AMP+ADP – ''Photobacterium profundum''<br />
**[[7owj]] – CoADK + GTP <br />
**[[6ln3]] - ADK+AMP+ATP – ''Aeropyrum pernix''<br />
**[[7owk]] – CoADK + TTP<br />
**[[6pjw]] - ADK+AMP – ''Methanotorris igneus''<br />
**[[7owl]] – CoADK + CTP<br />


*ADK complex with dinucletide polyphosphates
*ADK complex with dinucletide polyphosphates


**[[1z83]] – hADK 1+Zn+AP5<br />
**[[1z83]] – hADK 1+Zn+AP5<br />
**[[2c95]] – hADK 1+ malonate + AP4<br />
**[[2c9y]] - hADK 2+ A4P <br />
**[[2c9y]] - hADK 2+ A4P <br />
**[[2c95]] – hADK 1+ malonate + AP4<br />
**[[6zje]] – hADK 3 + AP5<br />
**[[6zjb]] – hADK 3 + G5P<br />
**[[2bbw]] - hADK 4+GP5 <br />
**[[2bbw]] - hADK 4+GP5 <br />
**[[5xz2]] – ADK +AP5 – zebrafish<br />
**[[5xz2]] – ADK +AP5 – zebrafish<br />
Line 61: Line 67:
**[[1aky]], [[2aky]] - yADK+AP5<br />
**[[1aky]], [[2aky]] - yADK+AP5<br />
**[[3aky]] - yADK (mutant)+AP5<br />
**[[3aky]] - yADK (mutant)+AP5<br />
**[[3hpq]], [[3hpr]], [[1e4v]], [[1e4y]], [[4x8l]], [[4x8m]], [[4x8o]], [[5eje]] - EcADK (mutant)+AP5<br />  
**[[3hpq]], [[3hpr]], [[1e4v]], [[1e4y]], [[4x8l]], [[4x8m]], [[4x8o]], [[5eje]], [[8bqf]], [[8q2b]] - EcADK (mutant)+AP5<br />  
**[[1ake]], [[6ham]], [[6hap]] - EcADK+AP5<br />
**[[1ake]], [[6ham]], [[6hap]] - EcADK+AP5<br />
**[[3x2s]] – EcADK 1+ Mg + pyrene acetamide + AP5<br />
**[[3x2s]] – EcADK 1+ Mg + pyrene acetamide + AP5<br />
**[[1ank]] - EcADK+AMP+AMPPNP<br />
**[[2eck]], [[4jzk]] - EcADK+AMP+ADP<br />
**[[8rj6]] – EcADK + AMP + ATP<br />
**[[3h86]] - ADK+AP5 - ''Methanococcus maripaludis''<br />
**[[3h86]] - ADK+AP5 - ''Methanococcus maripaludis''<br />
**[[3fb4]] - ADK+Zn+AP5 - ''Marinibacillus marinus''<br />
**[[3fb4]] - ADK+Zn+AP5 - ''Marinibacillus marinus''<br />
Line 69: Line 78:
**[[2qaj]], [[2oo7]], [[2p3s]], [[2ori]], [[2osb]], [[2eu8]], [[4mkf]], [[4mkg]], [[4mkh]], [[4qbf]], [[4qbg]], [[4qbh]], [[4qbi]], [[4typ]], [[4tyq]] - BsADK (mutant)+Zn+AP5<br />
**[[2qaj]], [[2oo7]], [[2p3s]], [[2ori]], [[2osb]], [[2eu8]], [[4mkf]], [[4mkg]], [[4mkh]], [[4qbf]], [[4qbg]], [[4qbh]], [[4qbi]], [[4typ]], [[4tyq]] - BsADK (mutant)+Zn+AP5<br />
**[[2rgx]] - AaADK+Zn+AP5 <br />
**[[2rgx]] - AaADK+Zn+AP5 <br />
**[[3sr0]] - AaADK+AMP+ADP + AlF4<br />
**[[3be4]] - CpADK+AP5 <br />
**[[3be4]] - CpADK+AP5 <br />
**[[1s3g]], [[5x6j]] - ADK+Zn+AP5 - ''Bacillus globisporus''<br />
**[[1s3g]], [[5x6j]] - ADK+Zn+AP5 - ''Bacillus globisporus''<br />
Line 75: Line 85:
**[[4nu0]], [[4w5j]] – SpADK +Mg +AP5<br />
**[[4nu0]], [[4w5j]] – SpADK +Mg +AP5<br />
**[[5x6k]], [[5x6l]], [[5xru]], [[5ycb]], [[5ycc]] – ADK + AP5 – ''Notothenia coriiceps''<br />
**[[5x6k]], [[5x6l]], [[5xru]], [[5ycb]], [[5ycc]] – ADK + AP5 – ''Notothenia coriiceps''<br />
**[[6psp]] - MiADK+AP5<br />
**[[1nks]] - ADK+AMP+ADP - ''Sulfolobus acidocaldarius''<br />
**[[4k46]] - ADK+AMP+ADP – ''Photobacterium profundum''<br />
**[[6ln3]] - ADK+AMP+ATP – ''Aeropyrum pernix''<br />
**[[7owe]] – CoADK + AP5<br />


*ADK complexes with ions
*ADK complexes with ions

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Michal Harel
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