4d2u: Difference between revisions

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<SX load='4d2u' size='340' side='right' viewer='molstar' caption='[[4d2u]], [[Resolution|resolution]] 17.00&Aring;' scene=''>
<SX load='4d2u' size='340' side='right' viewer='molstar' caption='[[4d2u]], [[Resolution|resolution]] 17.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4d2u]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D2U OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=4D2U FirstGlance]. <br>
<table><tr><td colspan='2'>[[4d2u]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D2U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4D2U FirstGlance]. <br>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4d2q|4d2q]]</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4d2u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d2u OCA], [https://pdbe.org/4d2u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4d2u RCSB], [https://www.ebi.ac.uk/pdbsum/4d2u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4d2u ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=4d2u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d2u OCA], [http://pdbe.org/4d2u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4d2u RCSB], [http://www.ebi.ac.uk/pdbsum/4d2u PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4d2u ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/CLPB_ECOLI CLPB_ECOLI]] Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase activity; ATP hydrolysis unfolds the denatured protein aggregates, which probably helps expose new hydrophobic binding sites on the surface of ClpB-bound aggregates, contributing to the solubilization and refolding of denatured protein aggregates by DnaK.<ref>PMID:10982797</ref> <ref>PMID:12624113</ref> <ref>PMID:14640692</ref>
[[https://www.uniprot.org/uniprot/CLPB_ECOLI CLPB_ECOLI]] Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase activity; ATP hydrolysis unfolds the denatured protein aggregates, which probably helps expose new hydrophobic binding sites on the surface of ClpB-bound aggregates, contributing to the solubilization and refolding of denatured protein aggregates by DnaK.<ref>PMID:10982797</ref> <ref>PMID:12624113</ref> <ref>PMID:14640692</ref>  
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== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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==See Also==
==See Also==
*[[Heat Shock Protein structures|Heat Shock Protein structures]]
*[[Heat Shock Protein structures|Heat Shock Protein structures]]
*[[3D structures of ClpB|3D structures of ClpB]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</SX>
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[[Category: Bacillus coli migula 1895]]
[[Category: Escherichia coli]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Bukau, B]]
[[Category: Bukau B]]
[[Category: Carroni, M]]
[[Category: Carroni M]]
[[Category: Clare, D K]]
[[Category: Clare DK]]
[[Category: Kopp, J]]
[[Category: Kopp J]]
[[Category: Kummer, E]]
[[Category: Kummer E]]
[[Category: Mogk, A]]
[[Category: Mogk A]]
[[Category: Oguchi, Y]]
[[Category: Oguchi Y]]
[[Category: Saibil, H R]]
[[Category: Saibil HR]]
[[Category: Sinning, I]]
[[Category: Sinning I]]
[[Category: Wendler, P]]
[[Category: Wendler P]]
[[Category: Chaperone]]
[[Category: Coiled-coil domain]]
[[Category: Disaggregase]]
[[Category: Wild type]]

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