GTPase HRas: Difference between revisions

Michal Harel (talk | contribs)
No edit summary
No edit summary
 
(4 intermediate revisions by one other user not shown)
Line 21: Line 21:
[[Ras Protein and Pancreas Cancer]]<br />
[[Ras Protein and Pancreas Cancer]]<br />
[[User:Joseph Lipsick/RAS]]<br />
[[User:Joseph Lipsick/RAS]]<br />
[[H RAS protein (hebrew)]]<br />
[[Chani elisha]].
[[Chani elisha]].


Line 29: Line 30:


== Structural highlights ==
== Structural highlights ==
Interactions with the <scene name='37/379455/Cv/6'>nucleotide phosphate moiety in the active site</scene> of GTPase Hras determine its active conformation<ref>PMID:242356730</ref>. Water molecules shown as red spheres.
Interactions with the <scene name='37/379455/Cv/6'>nucleotide phosphate moiety in the active site</scene> of GTPase Hras determine its active conformation<ref>PMID:242356730</ref>. Water molecules shown as red spheres. <scene name='37/379455/Cv/7'>Mg coordination site</scene>.
==3D structures of GTPase Hras==
[[GTPase Hras 3D structures]]
</StructureSection>
</StructureSection>
==3D structures of GTPase Hras==
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
{{#tree:id=OrganizedByTopic|openlevels=0|
*HRAS p21 catalytic domain residues 1-166
**[[5p21]], [[221p]], [[1ioz]], [[1p2t]], [[3k8y]], [[3l8z]], [[3rry]], [[3tgp]], [[3lbh]], [[4dlr]], [[4dls]], [[4dlt]], [[4dlu]], [[4dlv]], [[4dlw]], [[4dlx]], [[4dly]], [[4dlz]] - hHRAS – human<BR / >
**[[1plj]], [[1plk]], [[1pll]] – hHRAS - Laue<BR / >
**[[221p]], [[421p]], [[521p]], [[621p]], [[721p]], [[821p]], [[1agp]], [[3i3s]], [[3k9n]], [[3lo5]], [[3k9l]], [[3oiu]], [[3oiv]], [[3oiw]] – hHRAS (mutant)<br />
**[[2n42]], [[2n46]] - hHRAS (mutant) – NMR<br />
**[[3v4f]] – HRAS - rat
*HRAS p21 catalytic domain complex with nucleotides
**[[1crp]], [[1crq]], [[1crr]], [[1aa9]] – hHRAS + GDP - NMR<BR / >
**[[1q21]], [[4q21]] – hHRAS + GDP<BR / >
**[[4l9s]] - hHRAS (mutant) + GDP<br />
**[[5vbe]], [[5vbz]] - hHRAS  (mutant) + GDP + pyrazole derivative<br />
**[[5wdo]] - hHRAS  + GMPPNP<br />
**[[4l9w]], [[5wdp]], [[5wdq]] - hHRAS (mutant) + GMPPNP<br />
**[[6q21]], [[121p]] – hHRAS + GCP<BR / >
**[[1qra]] - hHRAS + GTP<BR / >
**[[1ctq]], [[4efl]], [[4rsg]], [[5b2z]], [[5b30]], [[5x9s]] - hHRAS + GPPNHP<BR / >
**[[1xcm]], [[2cl0]], [[2rga]], [[2rgb]], [[2rgc]], [[2rgd]], [[2rge]], [[2rgg]], [[3kkm]], [[3kkn]], [[4efm]], [[4efn]] - hHRAS  (mutant) + GPPNHP<BR / >
**[[1gnp]], [[1gnq]] - hHRAS + guanylate derivative<br / >
**[[4xvq]], [[4xvr]] - hHRAS (mutant) + guanylate derivative<br />
**[[2lcf]] - hHRAS (mutant) + guanylate derivative - NMR<BR / >
**[[1p2s]], [[1p2u]], [[1p2v]], [[3rrz]], [[3rs0]], [[3rs2]], [[3rs4]], [[3rs7]], [[3rsl]], [[3rso]] - hHRAS + alcohol + guanylate derivative<br / >
**[[3rs3]], [[3rs5]] - hHRAS + small organic molecule + guanylate derivative<br / >
**[[3lbh]], [[3lbi]], [[3lbn]] - hHRAS + salt + guanylate derivative<br / >
**[[3l8y]] - hHRAS + cyclen + guanylate derivative<br / >
**[[1clu]], [[1rvd]], [[1iaq]], [[1gnr]] - hHRAS (mutant) + GTP derivative<br / >
**[[1lf0]], [[1zw6]], [[2cl6]], [[2cl7]], [[2clc]], [[2evw]], [[1jah]], [[1jai]]- hHRAS (mutant) + GTP<BR / >
**[[1lf5]], [[1xj0]], [[1zvq]], [[2cld]], [[2ce2]], [[2quz]], [[2x1v]], [[2q21]] - hHRAS (mutant) + GDP<BR / >
*HRAS p21 catalytic domain complex with protein
**[[1wq1]] - hHRAS + p120GAP catalytic domain<BR / >
**[[1bkd]], [[1nvw]] - hHRAS + son of sevenless-1<BR / >
**[[5wfo]], [[5wfp]], [[5wfq]], [[5wfr]] - hHRAS + son of sevenless-1 homolog<br />
**[[1nvu]], [[1nvv]], [[1nvx]], [[1xd2]], [[4nyi]], [[4nyj]], [[4nym]] - hHRAS (mutant) + son of sevenless-1 homolog<BR / >
**[[4uru]], [[4urv]], [[4urw]], [[4urx]], [[4ury]], [[4urz]], [[4us0]], [[4us1]], [[4us2]] - hHRAS + son of sevenless-1 + inhibitor<br />
**[[1k8r]] - hHRAS + Byr2 RAS-binding domain<BR / >
**[[2c5l]] - hHRAS (mutant) + phosphoinositide-specific phospholipase RA2 domain<BR / >
**[[2uzi]], [[2vh5]] - hHRAS (mutant) + antibody<BR / >
**[[3ddc]] - hHRAS (mutant) + Ras association domain containing family protein RAS-binding domain<BR / >
**[[3kud]], [[4g0n]], [[4g3x]] - hHRAS + RAF proto-oncogene Ser/Thr-protein kinase<br />
**[[1lfd]] - hHRAS + Ral guanine nucleotide dissociation stimulator RAS-binding domain<br />
**[[4k81]] – hHRAS + growth factor receptor-bound protein<br />
**[[5e95]] – hHRAS + MB(NS1)<br />
**[[6axg]] – hHRAS + Ras guanyl-releasing protein 1<br />
**[[5wpl]] – hHRAS + Ras-binding peptide<br />
**[[6amb]] – hHRAS + afadin<br />
**[[1he8]] – hHRAS  (mutant) + P3K<br />
*HRAS p21 catalytic domain complex with inhibitor
**[[2lwi]] – hHRAS + inhibitor<br />
}}


==References==
==References==

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Joseph Lipsick, David Canner, Michal Harel, Alexander Berchansky, Jaime Prilusky, Joel L. Sussman