4xqw: Difference between revisions

No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 3: Line 3:
<StructureSection load='4xqw' size='340' side='right'caption='[[4xqw]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
<StructureSection load='4xqw' size='340' side='right'caption='[[4xqw]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4xqw]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_13631 Atcc 13631]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XQW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4XQW FirstGlance]. <br>
<table><tr><td colspan='2'>[[4xqw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Trichoderma_reesei Trichoderma reesei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XQW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4XQW FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4xpv|4xpv]], [[4xq4|4xq4]], [[4xqd|4xqd]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">xyn2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=51453 ATCC 13631])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4xqw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xqw OCA], [https://pdbe.org/4xqw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4xqw RCSB], [https://www.ebi.ac.uk/pdbsum/4xqw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4xqw ProSAT]</span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Endo-1,4-beta-xylanase Endo-1,4-beta-xylanase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.8 3.2.1.8] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4xqw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xqw OCA], [http://pdbe.org/4xqw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4xqw RCSB], [http://www.ebi.ac.uk/pdbsum/4xqw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4xqw ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/XYN2_HYPJR XYN2_HYPJR] Glycoside hydrolase involved in the hydrolysis of xylan, a major plant cell wall hemicellulose made up of 1,4-beta-linked D-xylopyranose residues. Catalyzes the endohydrolysis of the main-chain 1,4-beta-glycosidic bonds connecting the xylose subunits yielding various xylooligosaccharides and xylose (PubMed:1369024, Ref.5). The catalysis proceeds by a double-displacement reaction mechanism with a putative covalent glycosyl-enzyme intermediate, with retention of the anomeric configuration (PubMed:7988708). Produces xylobiose and xylose as the main degradation products (PubMed:19556747).<ref>PMID:1369024</ref> <ref>PMID:19556747</ref> <ref>PMID:7988708</ref> <ref>PMID:1369024</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Atcc 13631]]
[[Category: Endo-1,4-beta-xylanase]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Coates, L]]
[[Category: Trichoderma reesei]]
[[Category: Fisher, Z]]
[[Category: Coates L]]
[[Category: Graham, D E]]
[[Category: Fisher Z]]
[[Category: Hanson, L B]]
[[Category: Graham DE]]
[[Category: Kovalevsky, A Y]]
[[Category: Hanson LB]]
[[Category: Langan, P]]
[[Category: Kovalevsky AY]]
[[Category: Ostermann, A]]
[[Category: Langan P]]
[[Category: Park, J M]]
[[Category: Ostermann A]]
[[Category: Riccardi, D M]]
[[Category: Park JM]]
[[Category: Schrader, T]]
[[Category: Riccardi DM]]
[[Category: Smith, J C]]
[[Category: Schrader T]]
[[Category: Wan, Q]]
[[Category: Smith JC]]
[[Category: Hydrolase]]
[[Category: Wan Q]]
[[Category: Jelly roll]]

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA