1it8: Difference between revisions
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<StructureSection load='1it8' size='340' side='right'caption='[[1it8]], [[Resolution|resolution]] 2.50Å' scene=''> | <StructureSection load='1it8' size='340' side='right'caption='[[1it8]], [[Resolution|resolution]] 2.50Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[1it8]] is a 2 chain structure with sequence from [ | <table><tr><td colspan='2'>[[1it8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IT8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IT8 FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PQ0:2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDINE-5-CARBONITRILE'>PQ0</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PQ0:2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDINE-5-CARBONITRILE'>PQ0</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1it8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1it8 OCA], [https://pdbe.org/1it8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1it8 RCSB], [https://www.ebi.ac.uk/pdbsum/1it8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1it8 ProSAT], [https://www.topsan.org/Proteins/RSGI/1it8 TOPSAN]</span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | |||
</table> | </table> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/ATGT_PYRHO ATGT_PYRHO] Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs.[HAMAP-Rule:MF_01634] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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==See Also== | ==See Also== | ||
*[[TRNA-guanine transglycosylase|TRNA-guanine transglycosylase]] | *[[TRNA-guanine transglycosylase 3D structures|TRNA-guanine transglycosylase 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Fukai | [[Category: Pyrococcus horikoshii]] | ||
[[Category: Ishitani | [[Category: Fukai S]] | ||
[[Category: Kijimoto | [[Category: Ishitani R]] | ||
[[Category: Kondo | [[Category: Kijimoto T]] | ||
[[Category: Nameki | [[Category: Kondo H]] | ||
[[Category: Nishimura | [[Category: Nameki N]] | ||
[[Category: Nureki | [[Category: Nishimura S]] | ||
[[Category: Okada | [[Category: Nureki O]] | ||
[[Category: Okada N]] | |||
[[Category: Sekine | [[Category: Sekine M]] | ||
[[Category: Watanabe | [[Category: Watanabe M]] | ||
[[Category: Yokoyama | [[Category: Yokoyama S]] | ||