Monooxygenase 3D structures: Difference between revisions
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**[[4fni]] – SaIsdI (mutant) + heme-Fe + CN<br /> | **[[4fni]] – SaIsdI (mutant) + heme-Fe + CN<br /> | ||
**[[4nl5]] – MtMO + heme + CN – ''Mycobacterium tuberculosis''<br /> | **[[4nl5]] – MtMO + heme + CN – ''Mycobacterium tuberculosis''<br /> | ||
**[[6ds7]] - MtHO (mutant) + heme <br /> | |||
**[[6ds8]] – MtMO (mutant) + heme-Mn <br /> | |||
**[[4oz5]] – MO + heme – ''Bacillus subtilis''<br /> | **[[4oz5]] – MO + heme – ''Bacillus subtilis''<br /> | ||
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**[[5x68]] – hKMO + FAD - human<br /> | **[[5x68]] – hKMO + FAD - human<br /> | ||
**[[6lkd]], [[6lke]] – rKMO + FAD + inhibitor - rat<br /> | |||
**[[4j2w]], [[4j31]], [[4j33]], [[4j34]] – yKMO + FAD – yeast<br /> | **[[4j2w]], [[4j31]], [[4j33]], [[4j34]] – yKMO + FAD – yeast<br /> | ||
**[[4j36]], [[ | **[[4j36]], [[5x6r]] – yKMO + FAD + inhibitor<br /> | ||
**[[5x6q]] – yKMO (mutant) + FAD + inhibitor<br /> | **[[5x6q]] – yKMO (mutant) + FAD + inhibitor<br /> | ||
**[[5na5]], [[5x6p]] – PfKMO (mutant) + FAD – ''Pseudomonas fluorescens''<br /> | **[[5na5]], [[5x6p]] – PfKMO (mutant) + FAD – ''Pseudomonas fluorescens''<br /> | ||
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**[[5pah]], [[6pah]] – hFMO catalytic domain + inhibitor <br /> | **[[5pah]], [[6pah]] – hFMO catalytic domain + inhibitor <br /> | ||
*'''ActVA-Orf6 monooxygenase (AOMO)''' | *'''ActVA-Orf6 monooxygenase (AOMO)''' | ||
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**[[1n5v]] – ScAOMO + nanaomycine <br /> | **[[1n5v]] – ScAOMO + nanaomycine <br /> | ||
*Baeyer-Villiger monooxygenase (BVMO) | *'''Baeyer-Villiger monooxygenase (BVMO)''' | ||
**[[6jdk]] – BVMO – ''Parvibaculum lavamentivorans''<br /> | **[[6jdk]] – BVMO + FAD – ''Parvibaculum lavamentivorans''<br /> | ||
**[[6y48]] – BVMO + FAD + NADP – ''Aspergillus flavus''<br /> | |||
*'''Flavin-containing monooxygenase''' | *'''Flavin-containing monooxygenase''' | ||
**[[6wpu]] – MO + FAD – garlic<br /> | |||
**[[2gv8]] – fyMO + FAD + NADP – fission yeast<br /> | **[[2gv8]] – fyMO + FAD + NADP – fission yeast<br /> | ||
**[[2gvc]] – fyMO + FAD + NADP + methimazole<br /> | **[[2gvc]] – fyMO + FAD + NADP + methimazole<br /> | ||
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**[[5nmw]] – ZvMO + FAD – ''Zonocerus variegatus''<br /> | **[[5nmw]] – ZvMO + FAD – ''Zonocerus variegatus''<br /> | ||
**[[5nmx]] – ZvMO + FAD + NADP <br /> | **[[5nmx]] – ZvMO + FAD + NADP <br /> | ||
**[[6kbw]] – MO + FAD + NADP – ''Myroides profundi''<br /> | |||
**[[6se3]], [[6sek]], [[6sem]], [[6sf0]] – MO + FAD + NADP + O2 – synthetic<br /> | |||
**[[6u0p]] – StMO + FAD – ''Streptomyces''<br /> | |||
**[[6u0s]] – StMO + FAD + pyridine derivative<br /> | |||
**[[7d4k]], [[7d4m]], [[7d4n]] – MO + FAD + NADP – ''Candidatus pelagibacter''<br /> | |||
**[[6sem]] – anMO + FAD - ancestral<br /> | |||
**[[6se3]], [[6sek]], [[6sf0]], [[7al4]] – anMO + FAD + NADP <br /> | |||
**[[6hns]] – MO + FAD + NADP – ''Nitricola lacisaponensis''<br /> | |||
*2,4,6-trichlorophenol 4-monooxygenase | *'''2,4,6-trichlorophenol 4-monooxygenase''' | ||
**[[4g5e]] – MO – ''Cupriavidus necator''<br /> | **[[4g5e]] – MO – ''Cupriavidus necator''<br /> | ||
*Chlorophenol 4-monooxygenase | *'''Chlorophenol 4-monooxygenase''' | ||
**[[4oo2]] – MO – ''Streptomyces globisporus''<br /> | **[[4oo2]] – MO – ''Streptomyces globisporus''<br /> | ||
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**[[3k87]] – BcMO + FAD <br /> | **[[3k87]] – BcMO + FAD <br /> | ||
**[[3k88]] – BcMO + FAD + NAD <br /> | **[[3k88]] – BcMO + FAD + NAD <br /> | ||
**[[6jhm]] – MO – ''Ralstonia pickettii''<br /> | |||
**[[7e8p]], [[7e8q]] – RpMO + FAD derivative + nitrophenol <br /> | |||
*Phenylacetone monooxygenase | *'''Phenylacetone monooxygenase''' | ||
**[[4ovi]], [[4c74]] – TfMO + FAD + APADP – ''Thermobifida fusca''<br /> | **[[4ovi]], [[4c74]] – TfMO + FAD + APADP – ''Thermobifida fusca''<br /> | ||
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**[[2ym1]] – TfMO (mutant) + FAD + NADP + O2<br /> | **[[2ym1]] – TfMO (mutant) + FAD + NADP + O2<br /> | ||
*6-hydroxynicotinate 3-monooxygenase | *'''6-hydroxynicotinate 3-monooxygenase''' | ||
**[[5eow]] – PpMO + FAD – ''Pseudomonas putida''<br /> | **[[5eow]] – PpMO + FAD – ''Pseudomonas putida''<br /> | ||
*Styrene monooxygenase | *'''Styrene monooxygenase''' | ||
**[[3ihm]] – PpMO <br /> | **[[3ihm]] – PpMO <br /> | ||
**[[4f07]] – PpMO (mutant) + FAD <br /> | **[[4f07]] – PpMO (mutant) + FAD <br /> | ||
*Tryptophan 2-monooxygenase | *'''Tryptophan 2-monooxygenase''' | ||
**[[4iv9]] – MO + FAD – ''Pseudomonas savastanoi''<br /> | **[[4iv9]] – MO + FAD – ''Pseudomonas savastanoi''<br /> | ||
*Tryptophan 5-monooxygenase | *'''Tryptophan 5-monooxygenase''' | ||
**[[1mlw]] – hMO + Fe + dihydrobiopterin <br /> | **[[1mlw]] – hMO + Fe + dihydrobiopterin <br /> | ||
*Tyrosine 3-monooxygenase | *'''Tyrosine 3-monooxygenase''' | ||
**[[2xsn]] – hMO + Zn<br /> | **[[2xsn]] – hMO + Zn<br /> | ||
**[[2toh]] – rMO + Fe + dihydrobiopterin + tyrosine | **[[2toh]] – rMO + Fe + dihydrobiopterin + tyrosine y<br /> | ||
**[[2mda]] – rMO regulatory domain <br /> | **[[2mda]] – rMO regulatory domain <br /> | ||
*Nitronate monooxygenase | *'''Nitronate monooxygenase''' | ||
**[[4q4k]] – PaMO + FMN <br /> | **[[4q4k]] – PaMO + FMN <br /> | ||
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**[[6bka]] – MO + FMN – ''Cyberlyndnera mrakii''<br /> | **[[6bka]] – MO + FMN – ''Cyberlyndnera mrakii''<br /> | ||
*2- | *'''2-hydroxybiphenyl 3-monooxygenase''' | ||
**[[4z2r]] – PnMO + FAD – ''Pseudomonas nitroreducens''<br /> | **[[4z2r]], [[6em0]] – PnMO + FAD – ''Pseudomonas nitroreducens''<br /> | ||
**[[4cy6]] – PnMO (mutant) <br /> | **[[4cy6]] – PnMO (mutant) <br /> | ||
**[[4z2u]], [[4z2t]], [[4cy8]] – PnMO (mutant) + FAD <br /> | **[[4z2u]], [[4z2t]], [[4cy8]], [[6em0]] – PnMO (mutant) + FAD <br /> | ||
**[[5brt]] – PnMO + FAD + hydroxybephenyl <br /> | **[[5brt]] – PnMO + FAD + hydroxybephenyl <br /> | ||
*4-hydroxyphenylacetate 3-monooxygenase | *'''4-hydroxyphenylacetate 3-monooxygenase''' | ||
**[[4ira]] – BmMO + FAD – ''Brucella melitensis''<br /> | **[[4ira]] – BmMO + FAD – ''Brucella melitensis''<br /> | ||
**[[3cb0]] – BmMO + FMN<br /> | **[[3cb0]] – BmMO + FMN<br /> | ||
**[[6eb0]] – EcMO oxygenase subunit<br /> | **[[6eb0]], [[6qyh]] – EcMO oxygenase subunit<br /> | ||
**[[6b1b]] – EcMO oxygenase subunit (mutant)<br /> | **[[6b1b]] – EcMO oxygenase subunit (mutant)<br /> | ||
**[[6qyi]] – EcMO oxygenase subunit + FAD<br /> | |||
*Ornithine N(5)-monooxygenase | *'''Ornithine N(5)-monooxygenase''' | ||
**[[5cku]] – | **[[6x0i]] – NfMO + FAD + NADP – ''Neosartorya fumigata''<br /> | ||
**[[4nzh]], [[4b69]] – AfMO + FAD + ornithine – | **[[5cku]] – NfMO + FAD + NADP + ornithine <br /> | ||
**[[4b65]] – AfMO + FAD + NADP <br /> | **[[6x0h]] – AfMO (mutant) + FAD – ''Aspergillus fumigatus''<br /> | ||
**[[4nzh]], [[4b69]] – AfMO + FAD + ornithine <br /> | |||
**[[6x0k]] – AfMO (mutant) + FAD + ornithine <br /> | |||
**[[6x0h]], [[7jvk]] – AfMO (mutant) + FAD <br /> | |||
**[[4b65]], [[6x0i]] – AfMO + FAD + NADP <br /> | |||
**[[7jvl]] – AfMO (mutant) + FAD + NADP <br /> | |||
**[[4b68]], [[4b66]] – AfMO + FAD + NAP + arginine <br /> | **[[4b68]], [[4b66]] – AfMO + FAD + NAP + arginine <br /> | ||
**[[4b67]], [[4b63]] – AfMO + FAD + NADP + ornithine <br /> | **[[4b67]], [[4b63]] – AfMO + FAD + NADP + ornithine <br /> | ||
**[[6x0j]] – AfMO (mutant) + FAD + NADP + ornithine <br /> | |||
**[[4b64]] – AfMO + FAD + NADP + lysine <br /> | **[[4b64]] – AfMO + FAD + NADP + lysine <br /> | ||
**[[3s61]] – PaMO + FAD + NADP + ornithine derivative<br /> | **[[3s61]] – PaMO + FAD + NADP + ornithine derivative<br /> | ||
*Steroid monooxygenase | *'''Steroid monooxygenase''' | ||
**[[4ap1]], [[4aos]] – RrMO + FAD + NADP – ''Rhodococcus rhodochrous''<br /> | **[[4ap1]], [[4aos]] – RrMO + FAD + NADP – ''Rhodococcus rhodochrous''<br /> | ||
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**[[4ap3]] – RrMO (mutant) + FAD + NADP <br /> | **[[4ap3]] – RrMO (mutant) + FAD + NADP <br /> | ||
*Cyclohexanone monooxygenase | *'''Cyclohexanone monooxygenase''' | ||
**[[5m10]] – TmMO + FAD + NAP + nicotinamide – ''Thermocripsum municipale''<br /> | **[[5m10]] – TmMO + FAD + NAP + nicotinamide – ''Thermocripsum municipale''<br /> | ||
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**[[3ucl]] – RhMO + FAD + NADP + cyclohexanone <br /> | **[[3ucl]] – RhMO + FAD + NADP + cyclohexanone <br /> | ||
*Lysine 6-monooxygenase | *'''Lysine 6-monooxygenase''' | ||
**[[5cqf]] – MO – ''Pseudomonas syringae''<br /> | **[[5cqf]] – MO – ''Pseudomonas syringae''<br /> | ||
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**[[5o8r]] – EaMO + FAD + NADP <br /> | **[[5o8r]] – EaMO + FAD + NADP <br /> | ||
*EDTA monooxygenase | *'''EDTA monooxygenase''' | ||
**[[5dqp]] – MO – ''Chelativorans''<br /> | **[[5dqp]] – MO – ''Chelativorans''<br /> | ||
*Rifampicin monooxygenase or Pentachlorophenol 4-monooxygenase | *'''Rifampicin monooxygenase or Pentachlorophenol 4-monooxygenase''' | ||
**[[5vqb]] – SvMO + FAD – ''Sterptomyces venezuelae''<br /> | **[[5vqb]] – SvMO + FAD – ''Sterptomyces venezuelae''<br /> | ||
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**[[5kox]] – NfMO + FAD + rifampicin <br /> | **[[5kox]] – NfMO + FAD + rifampicin <br /> | ||
*3,6-diketocamphane 1,6 monooxygenase | *'''3,6-diketocamphane 1,6 monooxygenase''' | ||
**[[5aec]] – PpMO <br /> | **[[5aec]] – PpMO <br /> | ||
**[[4uwm]] – PpMO + FMN<br /> | **[[4uwm]] – PpMO + FMN<br /> | ||
*Lytic polysaccharide monooxygenase | *'''4-hydroxybenzoate 3 monooxygenase''' | ||
**[[6ju1]] – PaMO (mutant) + dihydroxybenzoate<br /> | |||
*'''FAD monooxygenase''' | |||
**[[6pvg]] – PfMO + FAD – ''Penicillium fellutamanum''<br /> | |||
**[[6pvf]], [[6pvj]] – PfMO + FAD + malbrancheamide <br /> | |||
**[[6pvh]]. [[6pvi]] – PfMO + FAD + paraherquamide <br /> | |||
*'''Lytic polysaccharide monooxygenase''' or '''LPMO''' | |||
**[[5tki]], [[5foh]], [[4qi8]] – NcMO-2 + Cu – ''Neurospora crassa''''Italic text''<br /> | **[[5tki]], [[5foh]], [[4qi8]] – NcMO-2 + Cu – ''Neurospora crassa''''Italic text''<br /> | ||
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**[[4mah]] – moMO + Zn<br /> | **[[4mah]] – moMO + Zn<br /> | ||
**[[5no7]] – MO – ''Pycnoporus cinnabarinus''<br /> | **[[5no7]] – MO – ''Pycnoporus cinnabarinus''<br /> | ||
**[[6ndq]] – MO – ''Kitsatospora papulosa''<br /> | |||
**[[6ydc]], [[6ydd]], [[6yde]], [[6ydf]] – MO + Cu – ''Collariella virescens<''br /> | |||
**[[7a8v]] – MO + Cu – ''Talaromyces verruculosus<''br /> | |||
**[[5lsv]], [[5t7j]], [[5t7k]], [[5t7n]], [[6tbr]], [[6tc4]] – AoMO + Zn – ''Aspergillus oryxae''<br /> | |||
**[[6tbq]] – AoMO + Zn + Cu<br /> | |||
**[[6z5y]] – MO + Cu – ''Phytophthora infestans<''br /> | |||
**[[6t5z]] – MO + Cu – ''Photorhabdus laumondii''<br /> | |||
**[[5opf]] – MO + Cu – ''Micromonospora aurantiaca''<br /> | |||
**[[5fjq]] – MO + Cu – ''Cellvibrio japonicus''<br /> | |||
**[[7ntl]] – MO + Cu – fungus<br /> | |||
**[[6if7]] – MO – fern<br /> | |||
**[[5msz]] – MO + Cu – firebrat<br /> | |||
**[[5o2w]] – MO + Cu – ''Trichoderma reesei''<br /> | |||
**[[5l2v]] – MO + Cu – ''Listeria monocytogenes''<br /> | |||
*Peptidyl-glycine alpha-amidating monooxygenase | *'''Peptidyl-glycine alpha-amidating monooxygenase''' | ||
**[[5mw0]], [[5wkw]] – rMO <br /> | **[[5mw0]], [[5wkw]] – rMO <br /> | ||
**[[1yjl]] – rMO (mutant)<br /> | **[[1yjl]] – rMO (mutant)<br /> | ||
**[[3mib]], [[3mic]], [[3mid]], [[3mie]], [[3mif]], [[3mig]], [[3mih]], [[3mlj]], [[3mlk]], [[3mll]], [[1opm]] – rMO + Cu + Ni <br /> | **[[3mib]], [[3mic]], [[3mid]], [[3mie]], [[3mif]], [[3mig]], [[3mih]], [[3mlj]], [[3mlk]], [[3mll]], [[1opm]] – rMO + Cu + Ni <br /> | ||
**[[6ao6]], [[5wja]] – rMO (mutant) + Cu + Ni<br /> | **[[6ao6]], [[5wja]], [[6nck]] – rMO (mutant) + Cu + Ni<br /> | ||
**[[1sdw]] – rMO + Cu + Ni + O2 + threonine derivative<br /> | **[[1sdw]] – rMO + Cu + Ni + O2 + threonine derivative<br /> | ||
**[[1yjk]], [[1yip]], [[1phm]] – rMO + Cu<br /> | **[[1yjk]], [[1yip]], [[1phm]] – rMO + Cu<br /> | ||
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**[[3fvz]] – rMO + Zn + Fe<br /> | **[[3fvz]] – rMO + Zn + Fe<br /> | ||
*Antibiotic biosynthesis monooxygenase | *'''Antibiotic biosynthesis monooxygenase''' | ||
**[[4hl9]] – MO – ''Rhodospirillum rubrum''<br /> | **[[4hl9]] – MO – ''Rhodospirillum rubrum''<br /> | ||
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**[[2ril]] – MO – ''Shewanella loihica''<br /> | **[[2ril]] – MO – ''Shewanella loihica''<br /> | ||
*Monooxygenase | *'''Monooxygenase''' | ||
**[[2i7g]] – MO – ''Agrobacterium tumefaciens''<br /> | **[[2i7g]] – MO – ''Agrobacterium tumefaciens''<br /> | ||
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**[[5f5n]] – MiMO + NAD + substrate <br /> | **[[5f5n]] – MiMO + NAD + substrate <br /> | ||
*Monooxygenase TROPB | *'''Monooxygenase TROPB''' | ||
**[[6nes]] – TsMO + FAD – ''Talaromyces stipitatus''<br /> | **[[6nes]] – TsMO + FAD – ''Talaromyces stipitatus''<br /> | ||
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**[[6net]] – TsMO + FAD + dihydroxy dimethylbenzaldehyde<br /> | **[[6net]] – TsMO + FAD + dihydroxy dimethylbenzaldehyde<br /> | ||
*Lactate 2-monooxygenase or lactate oxydase | *'''Lactate 2-monooxygenase or lactate oxydase''' | ||
**[[6dvi]] – MsLMO + FMN – ''Mycobacterium smegmatis''<br /> | **[[6dvi]] – MsLMO + FMN – ''Mycobacterium smegmatis''<br /> | ||
**[[6dvh]] – MsLMO (mutant) + FMN <br /> | **[[6dvh]] – MsLMO (mutant) + FMN <br /> | ||
**[[4rje]] – AvLMO – ''Aerococcus viridans'' <br /> | |||
**[[2du2]], [[2e77]], [[2zfa]] – AvLMO + FMN <br /> | |||
**[[2nli]] – AvLMO + FMN + lactate<br /> | |||
* | *'''Dimethyl-sulfide monooxygenase''' | ||
**[[ | **[[6ak1]] – DMOA – ''Hyphomicrobium sulfonivorans''<br /> | ||
* | *'''TetX monooxygenase''' or Flavin-dependent monooxygenase | ||
**[[ | **[[2xdo]], [[2xyo]] – BtTetX2 – ''Bacterioides thetaiotaomicron''<br /> | ||
**[[2y6q]], [[2y6r]] – BtTetX2 + tetracycline derivative <br /> | |||
**[[7epv]] – EcTetX4 <br /> | |||
**[[7epw]] – EcTetX4 + tetracycline derivative <br /> | |||
**[[8er1]] – CoTetX6 – Chryseobacterium oncorhynchi <br /> | |||
**[[8er0]] – ECoetX6 + tetracycline derivative <br /> | |||
'''Salicylate 1-monooxygenase''' or salicylate hydroxylase See [[Hydroxylase]] | |||
'''Methane monooxygenase''' See [[Methane monooxygenase]] | '''Methane monooxygenase''' See [[Methane monooxygenase]] | ||
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'''Luciferin 4-monooxygenase and Alkanal monooxygenase''' See [[Luciferase]] | '''Luciferin 4-monooxygenase and Alkanal monooxygenase''' See [[Luciferase]] | ||
'''Phenylalanine 4-monooxygenase''' or phenylalanine-4-hydroxylase See [[Hydroxylase]] | |||
'''Squalene monooxygenase''' or squalene epoxidase See [[Epoxidase]] | |||
}} | }} | ||
[[Category:Topic Page]] | [[Category:Topic Page]] |