1gbs: Difference between revisions

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<StructureSection load='1gbs' size='340' side='right'caption='[[1gbs]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
<StructureSection load='1gbs' size='340' side='right'caption='[[1gbs]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1gbs]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Anas_atrata Anas atrata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GBS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1GBS FirstGlance]. <br>
<table><tr><td colspan='2'>[[1gbs]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cygnus_atratus Cygnus atratus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GBS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1GBS FirstGlance]. <br>
</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gbs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gbs OCA], [http://pdbe.org/1gbs PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1gbs RCSB], [http://www.ebi.ac.uk/pdbsum/1gbs PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1gbs ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1gbs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gbs OCA], [https://pdbe.org/1gbs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1gbs RCSB], [https://www.ebi.ac.uk/pdbsum/1gbs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1gbs ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/LYG_CYGAT LYG_CYGAT]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gb/1gbs_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gb/1gbs_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Anas atrata]]
[[Category: Cygnus atratus]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Lysozyme]]
[[Category: Isaacs N]]
[[Category: Isaacs, N]]
[[Category: Machin K]]
[[Category: Machin, K]]
[[Category: Rao Z]]
[[Category: Rao, Z]]

Latest revision as of 03:00, 21 November 2024

CRYSTAL STRUCTURE OF BLACK SWAN GOOSE-TYPE LYSOZYME AT 1.8 ANGSTROMS RESOLUTIONCRYSTAL STRUCTURE OF BLACK SWAN GOOSE-TYPE LYSOZYME AT 1.8 ANGSTROMS RESOLUTION

Structural highlights

1gbs is a 1 chain structure with sequence from Cygnus atratus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.5Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

LYG_CYGAT

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

The crystal structure of a goose-type lysozyme from the egg white of black swan has been determined at 1.9 A resolution using a semi-automatic procedure based on the Calpha coordinates of the homologous goose protein.

A strategy for rapid and effective refinement applied to black swan lysozyme.,Rao Z, Esnouf R, Isaacs N, Stuart D Acta Crystallogr D Biol Crystallogr. 1995 May 1;51(Pt 3):331-6. PMID:15299299[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Rao Z, Esnouf R, Isaacs N, Stuart D. A strategy for rapid and effective refinement applied to black swan lysozyme. Acta Crystallogr D Biol Crystallogr. 1995 May 1;51(Pt 3):331-6. PMID:15299299 doi:10.1107/S0907444994009893

1gbs, resolution 1.50Å

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OCA