6s12: Difference between revisions

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OCA

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-'''Unreleased structure'''
-The entry 6s12 is ON HOLD
+==Erythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22).==
+<SX load='6s12' size='340' side='right' viewer='molstar' caption='[[6s12]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[6s12]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6S12 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6S12 FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.2&#8491;</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6s12 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6s12 OCA], [https://pdbe.org/6s12 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6s12 RCSB], [https://www.ebi.ac.uk/pdbsum/6s12 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6s12 ProSAT]</span></td></tr>
+</table>
+<div style="background-color:#fffaf0;">
+== Publication Abstract from PubMed ==
+The clinical use of the antibiotic erythromycin (ery) is hampered owing to the spread of resistance genes that are mostly mutating rRNA around the ery binding site at the entrance to the protein exit tunnel. Additional effective resistance mechanisms include deletion or insertion mutations in ribosomal protein uL22, which lead to alterations of the exit tunnel shape, located 16 A away from the drug's binding site. We determined the cryo-EM structures of the Staphylococcus aureus 70S ribosome, and its ery bound complex with a two amino acid deletion mutation in its ss hairpin loop, which grants the bacteria resistance to ery. The structures reveal that, although the binding of ery is stable, the movement of the flexible shorter uL22 loop towards the tunnel wall creates a wider path for nascent proteins, thus enabling bypass of the barrier formed by the drug. Moreover, upon drug binding, the tunnel widens further.
-Authors: Halfon, Y., Matozv, D., Eyal, Z., Bashan, A., Zimmerman, E., Kjeldgaard, J., Ingmer, H., Yonath, A.
+Exit tunnel modulation as resistance mechanism of S. aureus erythromycin resistant mutant.,Halfon Y, Matzov D, Eyal Z, Bashan A, Zimmerman E, Kjeldgaard J, Ingmer H, Yonath A Sci Rep. 2019 Aug 7;9(1):11460. doi: 10.1038/s41598-019-48019-1. PMID:31391518<ref>PMID:31391518</ref>
-Description: Erythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22).
+From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-[[Category: Unreleased Structures]]
+</div>
-[[Category: Eyal, Z]]
+<div class="pdbe-citations 6s12" style="background-color:#fffaf0;"></div>
-[[Category: Matozv, D]]
-[[Category: Bashan, A]]
+==See Also==
-[[Category: Yonath, A]]
+*[[Ribosome 3D structures|Ribosome 3D structures]]
-[[Category: Halfon, Y]]
+== References ==
-[[Category: Ingmer, H]]
+<references/>
-[[Category: Kjeldgaard, J]]
+__TOC__
-[[Category: Zimmerman, E]]
+</SX>
+[[Category: Large Structures]]
+[[Category: Staphylococcus aureus]]
+[[Category: Bashan A]]
+[[Category: Eyal Z]]
+[[Category: Halfon Y]]
+[[Category: Ingmer H]]
+[[Category: Kjeldgaard J]]
+[[Category: Matozv D]]
+[[Category: Yonath A]]
+[[Category: Zimmerman E]]