3co5: Difference between revisions

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==Crystal structure of sigma-54 interaction domain of putative transcriptional response regulator from Neisseria gonorrhoeae==
The line below this paragraph, containing "STRUCTURE_3co5", creates the "Structure Box" on the page.
<StructureSection load='3co5' size='340' side='right'caption='[[3co5]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3co5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Neig1 Neig1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CO5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CO5 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene></td></tr>
-->
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3co5|  PDB=3co5  |  SCENE= }}
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NGO1866 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=242231 NEIG1])</td></tr>
 
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3co5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3co5 OCA], [https://pdbe.org/3co5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3co5 RCSB], [https://www.ebi.ac.uk/pdbsum/3co5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3co5 ProSAT], [https://www.topsan.org/Proteins/MCSG/3co5 TOPSAN]</span></td></tr>
'''Crystal structure of sigma-54 interaction domain of putative transcriptional response regulator from Neisseria gonorrhoeae'''
</table>
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
3CO5 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Neisseria_gonorrhoeae_fa_1090 Neisseria gonorrhoeae fa 1090]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CO5 OCA].  
  <jmolCheckbox>
[[Category: Neisseria gonorrhoeae fa 1090]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/co/3co5_consurf.spt"</scriptWhenChecked>
[[Category: Single protein]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Bigelow, L.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Clancy, S.]]
  </jmolCheckbox>
[[Category: Hendricks, R.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3co5 ConSurf].
[[Category: Joachimiak, A.]]
<div style="clear:both"></div>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
__TOC__
[[Category: Osipiuk, J.]]
</StructureSection>
[[Category: Large Structures]]
[[Category: Neig1]]
[[Category: Bigelow, L]]
[[Category: Clancy, S]]
[[Category: Hendricks, R]]
[[Category: Joachimiak, A]]
[[Category: Structural genomic]]
[[Category: Osipiuk, J]]
[[Category: Apc89341 1]]
[[Category: Apc89341 1]]
[[Category: Mcsg]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: PSI, Protein structure initiative]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Sigma-54 interaction domain]]
[[Category: Sigma-54 interaction domain]]
[[Category: Structural genomic]]
[[Category: Transcription regulator]]
[[Category: Transcription regulator]]
[[Category: Transcriptional response regulator]]
[[Category: Transcriptional response regulator]]

Latest revision as of 11:02, 27 January 2022

Crystal structure of sigma-54 interaction domain of putative transcriptional response regulator from Neisseria gonorrhoeaeCrystal structure of sigma-54 interaction domain of putative transcriptional response regulator from Neisseria gonorrhoeae

Structural highlights

3co5 is a 2 chain structure with sequence from Neig1. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
NonStd Res:
Gene:NGO1866 (NEIG1)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3co5, resolution 2.40Å

Drag the structure with the mouse to rotate

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OCA
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