2b13: Difference between revisions

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 ==Truncated S. aureus LytM, P41 crystal form==
-<StructureSection load='2b13' size='340' side='right' caption='[[2b13]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
+<StructureSection load='2b13' size='340' side='right'caption='[[2b13]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2b13]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus aureus" (rosenbach 1884) zopf 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2B13 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2B13 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2b13]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2B13 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2B13 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1qwy|1qwy]], [[2b44|2b44]], [[2b0p|2b0p]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lytM ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2b13 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2b13 OCA], [https://pdbe.org/2b13 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2b13 RCSB], [https://www.ebi.ac.uk/pdbsum/2b13 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2b13 ProSAT]</span></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysostaphin Lysostaphin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.24.75 3.4.24.75] </span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2b13 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2b13 OCA], [http://pdbe.org/2b13 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2b13 RCSB], [http://www.ebi.ac.uk/pdbsum/2b13 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2b13 ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/LYTM_STAA8 LYTM_STAA8]] Peptidoglycan hydrolase (autolysin) specifically acting on polyglycine interpeptide bridges of the cell wall peptidoglycan.<ref>PMID:10220159</ref> <ref>PMID:8095258</ref>
+[https://www.uniprot.org/uniprot/LYTM_STAA8 LYTM_STAA8] Peptidoglycan hydrolase (autolysin) specifically acting on polyglycine interpeptide bridges of the cell wall peptidoglycan.<ref>PMID:10220159</ref> <ref>PMID:8095258</ref>
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
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 __TOC__
 </StructureSection>
-[[Category: Lysostaphin]]
+[[Category: Large Structures]]
-[[Category: Bochtler, M]]
+[[Category: Staphylococcus aureus]]
-[[Category: Firczuk, M]]
+[[Category: Bochtler M]]
-[[Category: Mucha, A]]
+[[Category: Firczuk M]]
-[[Category: Hydrolase]]
+[[Category: Mucha A]]
-[[Category: Lytm]]
-[[Category: Peptidase]]
-[[Category: Peptidoglycan amidase]]