5g2b: Difference between revisions

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 ==Crystal structure of T. brucei PDE-B1 catalytic domain with inhibitor NPD-008==
-<StructureSection load='5g2b' size='340' side='right' caption='[[5g2b]], [[Resolution|resolution]] 1.83&Aring;' scene=''>
+<StructureSection load='5g2b' size='340' side='right'caption='[[5g2b]], [[Resolution|resolution]] 1.83&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5g2b]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Trypanosoma_(trypanozoon)_brucei Trypanosoma (trypanozoon) brucei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5G2B OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5G2B FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5g2b]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trypanosoma_brucei Trypanosoma brucei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5G2B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5G2B FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GAI:GUANIDINE'>GAI</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=LQY:N-(2-amino-2-oxoethyl)-5-[(4aR,8aS)-3-cycloheptyl-4-oxo-3,4,4a,5,8,8a-hexahydrophthalazin-1-yl]-2-methoxy[1,1-biphenyl]-4-carboxamide'>LQY</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.83&#8491;</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5g2b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5g2b OCA], [http://pdbe.org/5g2b PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5g2b RCSB], [http://www.ebi.ac.uk/pdbsum/5g2b PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5g2b ProSAT]</span></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GAI:GUANIDINE'>GAI</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=LQY:N-(2-amino-2-oxoethyl)-5-[(4aR,8aS)-3-cycloheptyl-4-oxo-3,4,4a,5,8,8a-hexahydrophthalazin-1-yl]-2-methoxy[1,1-biphenyl]-4-carboxamide'>LQY</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5g2b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5g2b OCA], [https://pdbe.org/5g2b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5g2b RCSB], [https://www.ebi.ac.uk/pdbsum/5g2b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5g2b ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q8WQX9_9TRYP Q8WQX9_9TRYP]
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 18: / Line 21: @@
 ==See Also==
-*[[Phosphodiesterase|Phosphodiesterase]]
+*[[Phosphodiesterase 3D structures|Phosphodiesterase 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Anthonyrajah, E S]]
+[[Category: Large Structures]]
-[[Category: Brown, D G]]
+[[Category: Trypanosoma brucei]]
-[[Category: Singh, A K]]
+[[Category: Anthonyrajah ES]]
-[[Category: African trypanosomiasis]]
+[[Category: Brown DG]]
-[[Category: Hydrolase]]
+[[Category: Singh AK]]
-[[Category: Parasitic pde]]
-[[Category: Sleeping sickness]]