3lio: Difference between revisions

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 ==X-ray structure of the iron superoxide dismutase from pseudoalteromonas haloplanktis (crystal form I)==
-<StructureSection load='3lio' size='340' side='right' caption='[[3lio]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
+<StructureSection load='3lio' size='340' side='right'caption='[[3lio]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3lio]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseht Pseht]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LIO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LIO FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3lio]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudoalteromonas_translucida_TAC125 Pseudoalteromonas translucida TAC125]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LIO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LIO FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=TRE:TREHALOSE'>TRE</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3lj9|3lj9]], [[3ljf|3ljf]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=PRD_900006:trehalose'>PRD_900006</scene></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PSHAa1215, sodB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=326442 PSEHT])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lio FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lio OCA], [https://pdbe.org/3lio PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lio RCSB], [https://www.ebi.ac.uk/pdbsum/3lio PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lio ProSAT]</span></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Superoxide_dismutase Superoxide dismutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.15.1.1 1.15.1.1] </span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lio FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lio OCA], [http://pdbe.org/3lio PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3lio RCSB], [http://www.ebi.ac.uk/pdbsum/3lio PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3lio ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/SODF_PSEHT SODF_PSEHT]] Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.<ref>PMID:16713057</ref>
+[https://www.uniprot.org/uniprot/SODF_PSET1 SODF_PSET1] Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.<ref>PMID:16713057</ref>
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
@@ Line 33: / Line 31: @@
 ==See Also==
-*[[Superoxide Dismutase|Superoxide Dismutase]]
+*[[Superoxide dismutase 3D structures|Superoxide dismutase 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Pseht]]
+[[Category: Large Structures]]
-[[Category: Superoxide dismutase]]
+[[Category: Pseudoalteromonas translucida TAC125]]
-[[Category: Conte, M]]
+[[Category: Conte M]]
-[[Category: Krauss, I Russo]]
+[[Category: Merlino A]]
-[[Category: Merlino, A]]
+[[Category: Rossi B]]
-[[Category: Rossi, B]]
+[[Category: Russo Krauss I]]
-[[Category: Sica, F]]
+[[Category: Sica F]]
-[[Category: Vergara, A]]
+[[Category: Vergara A]]
-[[Category: Cold adaptation]]
-[[Category: Flexibility]]
-[[Category: Metal-binding]]
-[[Category: Oxidoreductase]]
-[[Category: Psychrophilic protein]]
-[[Category: Thermal stability]]