6cgp: Difference between revisions

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OCA

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 ==Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with MAIP-032==
-<StructureSection load='6cgp' size='340' side='right' caption='[[6cgp]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
+<StructureSection load='6cgp' size='340' side='right'caption='[[6cgp]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[6cgp]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Brachidanio_rerio Brachidanio rerio]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6CGP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6CGP FirstGlance]. <br>
+<table><tr><td colspan='2'>[[6cgp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Danio_rerio Danio rerio]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6CGP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6CGP FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=F1Y:N-hydroxy-4-[(2-propylimidazo[1,2-a]pyridin-3-yl)amino]benzamide'>F1Y</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">hdac6 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7955 Brachidanio rerio])</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=F1Y:N-hydroxy-4-[(2-propylimidazo[1,2-a]pyridin-3-yl)amino]benzamide'>F1Y</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6cgp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6cgp OCA], [http://pdbe.org/6cgp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6cgp RCSB], [http://www.ebi.ac.uk/pdbsum/6cgp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6cgp ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6cgp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6cgp OCA], [https://pdbe.org/6cgp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6cgp RCSB], [https://www.ebi.ac.uk/pdbsum/6cgp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6cgp ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/A7YT55_DANRE A7YT55_DANRE]
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 19: / Line 21: @@
 ==See Also==
-*[[Histone deacetylase|Histone deacetylase]]
+*[[Histone deacetylase 3D structures|Histone deacetylase 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Brachidanio rerio]]
+[[Category: Danio rerio]]
-[[Category: Christianson, D W]]
+[[Category: Large Structures]]
-[[Category: Osko, J D]]
+[[Category: Christianson DW]]
-[[Category: Histone deacetylase]]
+[[Category: Osko JD]]
-[[Category: Hydrolase-hydrolase inhibitor complex]]
-[[Category: Metallohydrolase]]