3c37: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(13 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:3c37.jpg|left|200px]]


{{Structure
==X-ray structure of the putative Zn-dependent peptidase Q74D82 at the resolution 1.7 A. Northeast Structural Genomics Consortium target GsR143A==
|PDB= 3c37 |SIZE=350|CAPTION= <scene name='initialview01'>3c37</scene>, resolution 1.70&Aring;
<StructureSection load='3c37' size='340' side='right'caption='[[3c37]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
|SITE= <scene name='pdbsite=AC1:Zn+Binding+Site+For+Residue+A+301'>AC1</scene>, <scene name='pdbsite=AC2:Zn+Binding+Site+For+Residue+B+301'>AC2</scene>, <scene name='pdbsite=AC3:Peg+Binding+Site+For+Residue+A+400'>AC3</scene> and <scene name='pdbsite=AC4:Peg+Binding+Site+For+Residue+B+400'>AC4</scene>
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
<table><tr><td colspan='2'>[[3c37]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacter_sulfurreducens_PCA Geobacter sulfurreducens PCA]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C37 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C37 FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
|GENE= GSU1437 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243231 Geobacter sulfurreducens PCA])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c37 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c37 OCA], [https://pdbe.org/3c37 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c37 RCSB], [https://www.ebi.ac.uk/pdbsum/3c37 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c37 ProSAT], [https://www.topsan.org/Proteins/NESGC/3c37 TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3c37 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c37 OCA], [http://www.ebi.ac.uk/pdbsum/3c37 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3c37 RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/Q74D82_GEOSL Q74D82_GEOSL]
 
== Evolutionary Conservation ==
'''X-ray structure of the putative Zn-dependent peptidase Q74D82 at the resolution 1.7 A. Northeast Structural Genomics Consortium target GsR143A'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c3/3c37_consurf.spt"</scriptWhenChecked>
3C37 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Geobacter_sulfurreducens_pca Geobacter sulfurreducens pca]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C37 OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Geobacter sulfurreducens pca]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Single protein]]
  </jmolCheckbox>
[[Category: Acton, T B.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c37 ConSurf].
[[Category: Baran, M C.]]
<div style="clear:both"></div>
[[Category: Forouhar, F.]]
__TOC__
[[Category: Hunt, J F.]]
</StructureSection>
[[Category: Kuzin, A P.]]
[[Category: Geobacter sulfurreducens PCA]]
[[Category: Liu, J.]]
[[Category: Large Structures]]
[[Category: Maglaqui, M.]]
[[Category: Acton TB]]
[[Category: Mao, L.]]
[[Category: Baran MC]]
[[Category: Montelione, G T.]]
[[Category: Chen Y]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Forouhar F]]
[[Category: Rost, B.]]
[[Category: Hunt JF]]
[[Category: Seetharaman, J.]]
[[Category: Kuzin AP]]
[[Category: Tong, L.]]
[[Category: Liu J]]
[[Category: Vorobiev, S M.]]
[[Category: Maglaqui M]]
[[Category: Wang, D.]]
[[Category: Mao L]]
[[Category: Xiao, R.]]
[[Category: Montelione GT]]
[[Category: Yang, C.]]
[[Category: Rost B]]
[[Category: gsr143a]]
[[Category: Seetharaman J]]
[[Category: hydrolase]]
[[Category: Tong L]]
[[Category: m48 family]]
[[Category: Vorobiev SM]]
[[Category: metalloprotease]]
[[Category: Wang D]]
[[Category: nesg]]
[[Category: Xiao R]]
[[Category: northeast structural genomics consortium]]
[[Category: peptidase]]
[[Category: protease]]
[[Category: protein structure initiative]]
[[Category: psi-2]]
[[Category: q74d82]]
[[Category: structural genomic]]
[[Category: x-ray]]
[[Category: zinc]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:30:20 2008''

Latest revision as of 11:51, 30 October 2024

X-ray structure of the putative Zn-dependent peptidase Q74D82 at the resolution 1.7 A. Northeast Structural Genomics Consortium target GsR143AX-ray structure of the putative Zn-dependent peptidase Q74D82 at the resolution 1.7 A. Northeast Structural Genomics Consortium target GsR143A

Structural highlights

3c37 is a 2 chain structure with sequence from Geobacter sulfurreducens PCA. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.7Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q74D82_GEOSL

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3c37, resolution 1.70Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=3c37&oldid=4204753"