3fk8: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:


==The crystal structure of disulphide isomerase from Xylella fastidiosa Temecula1==
==The crystal structure of disulphide isomerase from Xylella fastidiosa Temecula1==
<StructureSection load='3fk8' size='340' side='right' caption='[[3fk8]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
<StructureSection load='3fk8' size='340' side='right'caption='[[3fk8]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3fk8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Xylft Xylft]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FK8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3FK8 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3fk8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Xylella_fastidiosa_Temecula1 Xylella fastidiosa Temecula1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FK8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FK8 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PD_1033, Xylella fastidiosa ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=183190 XYLFT])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fk8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fk8 OCA], [https://pdbe.org/3fk8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fk8 RCSB], [https://www.ebi.ac.uk/pdbsum/3fk8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fk8 ProSAT], [https://www.topsan.org/Proteins/MCSG/3fk8 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3fk8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fk8 OCA], [http://pdbe.org/3fk8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3fk8 RCSB], [http://www.ebi.ac.uk/pdbsum/3fk8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3fk8 ProSAT], [http://www.topsan.org/Proteins/MCSG/3fk8 TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q87CN2_XYLFT Q87CN2_XYLFT]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 14: Line 15:
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fk/3fk8_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fk/3fk8_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
Line 21: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Xylft]]
[[Category: Large Structures]]
[[Category: Joachimiak, A]]
[[Category: Xylella fastidiosa Temecula1]]
[[Category: Structural genomic]]
[[Category: Joachimiak A]]
[[Category: Sather, A]]
[[Category: Sather A]]
[[Category: Shackelford, G]]
[[Category: Shackelford G]]
[[Category: Tan, K]]
[[Category: Tan K]]
[[Category: Apc61824 1]]
[[Category: Disulphide isomerase]]
[[Category: Isomerase]]
[[Category: Mcsg]]
[[Category: PSI, Protein structure initiative]]
[[Category: Xylella fastidiosa temecula1]]

Latest revision as of 04:49, 21 November 2024

The crystal structure of disulphide isomerase from Xylella fastidiosa Temecula1The crystal structure of disulphide isomerase from Xylella fastidiosa Temecula1

Structural highlights

3fk8 is a 1 chain structure with sequence from Xylella fastidiosa Temecula1. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.3Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q87CN2_XYLFT

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3fk8, resolution 1.30Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA