3edp: Difference between revisions

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==The crystal structure of the protein lin2111 (functionally unknown) from Listeria innocua Clip11262==
==The crystal structure of the protein lin2111 (functionally unknown) from Listeria innocua Clip11262==
<StructureSection load='3edp' size='340' side='right' caption='[[3edp]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
<StructureSection load='3edp' size='340' side='right'caption='[[3edp]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3edp]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"listeria_innocua"_seeliger_and_schoofs_1979 "listeria innocua" seeliger and schoofs 1979]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EDP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3EDP FirstGlance]. <br>
<table><tr><td colspan='2'>[[3edp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Listeria_innocua Listeria innocua]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EDP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EDP FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.092&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lin2111 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1642 "Listeria innocua" Seeliger and Schoofs 1979])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3edp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3edp OCA], [https://pdbe.org/3edp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3edp RCSB], [https://www.ebi.ac.uk/pdbsum/3edp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3edp ProSAT], [https://www.topsan.org/Proteins/MCSG/3edp TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3edp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3edp OCA], [http://pdbe.org/3edp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3edp RCSB], [http://www.ebi.ac.uk/pdbsum/3edp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3edp ProSAT], [http://www.topsan.org/Proteins/MCSG/3edp TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q92A11_LISIN Q92A11_LISIN]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ed/3edp_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ed/3edp_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Listeria innocua seeliger and schoofs 1979]]
[[Category: Large Structures]]
[[Category: Gu, M]]
[[Category: Listeria innocua]]
[[Category: Jaurequi, L]]
[[Category: Gu M]]
[[Category: Joachimiak, A]]
[[Category: Jaurequi L]]
[[Category: Structural genomic]]
[[Category: Joachimiak A]]
[[Category: Tan, K]]
[[Category: Tan K]]
[[Category: Apc88337]]
[[Category: Dna-binding]]
[[Category: Lin2111]]
[[Category: Listeria innocua clip11262]]
[[Category: Mcsg]]
[[Category: PSI, Protein structure initiative]]
[[Category: Transcription]]
[[Category: Transcription regulation]]
[[Category: Unknown function]]

Latest revision as of 04:45, 21 November 2024

The crystal structure of the protein lin2111 (functionally unknown) from Listeria innocua Clip11262The crystal structure of the protein lin2111 (functionally unknown) from Listeria innocua Clip11262

Structural highlights

3edp is a 2 chain structure with sequence from Listeria innocua. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.092Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q92A11_LISIN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3edp, resolution 2.09Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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