5ty2: Difference between revisions

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 ==Crystal structure of S. aureus penicillin binding protein 4 (PBP4) mutant (E183A, F241R) in complex with nafcillin==
-<StructureSection load='5ty2' size='340' side='right' caption='[[5ty2]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
+<StructureSection load='5ty2' size='340' side='right'caption='[[5ty2]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5ty2]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Staac Staac]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TY2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5TY2 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5ty2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_COL Staphylococcus aureus subsp. aureus COL]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TY2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5TY2 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NFF:(2R,4S)-2-[(1R)-1-{[(2-ETHOXYNAPHTHALEN-1-YL)CARBONYL]AMINO}-2-OXOETHYL]-5,5-DIMETHYL-1,3-THIAZOLIDINE-4-CARBOXYLIC+ACID'>NFF</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pbp4, SACOL0699 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=93062 STAAC])</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NFF:(2R,4S)-2-[(1R)-1-{[(2-ETHOXYNAPHTHALEN-1-YL)CARBONYL]AMINO}-2-OXOETHYL]-5,5-DIMETHYL-1,3-THIAZOLIDINE-4-CARBOXYLIC+ACID'>NFF</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ty2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ty2 OCA], [http://pdbe.org/5ty2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ty2 RCSB], [http://www.ebi.ac.uk/pdbsum/5ty2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ty2 ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ty2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ty2 OCA], [https://pdbe.org/5ty2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ty2 RCSB], [https://www.ebi.ac.uk/pdbsum/5ty2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ty2 ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/A0A0H2WY27_STAAC A0A0H2WY27_STAAC]
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 17: / Line 19: @@
 </div>
 <div class="pdbe-citations 5ty2" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[Penicillin-binding protein 3D structures|Penicillin-binding protein 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Staac]]
+[[Category: Large Structures]]
-[[Category: Alexander, J A.N]]
+[[Category: Staphylococcus aureus subsp. aureus COL]]
-[[Category: Strynadka, N C.J]]
+[[Category: Alexander JAN]]
-[[Category: Antibiotic]]
+[[Category: Strynadka NCJ]]
-[[Category: Hydrolase]]
-[[Category: Hydrolase - antibiotic complex]]