3drm: Difference between revisions
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==2.2 Angstrom Crystal Structure of Thr114Phe Alpha1-Antitrypsin== | ==2.2 Angstrom Crystal Structure of Thr114Phe Alpha1-Antitrypsin== | ||
<StructureSection load='3drm' size='340' side='right' caption='[[3drm]], [[Resolution|resolution]] 2.20Å' scene=''> | <StructureSection load='3drm' size='340' side='right'caption='[[3drm]], [[Resolution|resolution]] 2.20Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3drm]] is a 1 chain structure with sequence from [ | <table><tr><td colspan='2'>[[3drm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DRM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DRM FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2Å</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3drm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3drm OCA], [https://pdbe.org/3drm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3drm RCSB], [https://www.ebi.ac.uk/pdbsum/3drm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3drm ProSAT]</span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | |||
</table> | </table> | ||
== Disease == | == Disease == | ||
[ | [https://www.uniprot.org/uniprot/A1AT_HUMAN A1AT_HUMAN] Defects in SERPINA1 are the cause of alpha-1-antitrypsin deficiency (A1ATD) [MIM:[https://omim.org/entry/613490 613490]. A disorder whose most common manifestation is emphysema, which becomes evident by the third to fourth decade. A less common manifestation of the deficiency is liver disease, which occurs in children and adults, and may result in cirrhosis and liver failure. Environmental factors, particularly cigarette smoking, greatly increase the risk of emphysema at an earlier age.<ref>PMID:1905728</ref> <ref>PMID:2390072</ref> <ref>PMID:2227940</ref> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/A1AT_HUMAN A1AT_HUMAN] Inhibitor of serine proteases. Its primary target is elastase, but it also has a moderate affinity for plasmin and thrombin. Irreversibly inhibits trypsin, chymotrypsin and plasminogen activator. The aberrant form inhibits insulin-induced NO synthesis in platelets, decreases coagulation time and has proteolytic activity against insulin and plasmin.[:]<ref>PMID:1906855</ref> <ref>PMID:1406456</ref> Short peptide from AAT: reversible chymotrypsin inhibitor. It also inhibits elastase, but not trypsin. Its major physiological function is the protection of the lower respiratory tract against proteolytic destruction by human leukocyte elastase (HLE).[:]<ref>PMID:1906855</ref> <ref>PMID:1406456</ref> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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==See Also== | ==See Also== | ||
*[[Alpha-1-antitrypsin|Alpha-1-antitrypsin]] | *[[Alpha-1-antitrypsin 3D structures|Alpha-1-antitrypsin 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Homo sapiens]] | ||
[[Category: Barrett | [[Category: Large Structures]] | ||
[[Category: Gooptu | [[Category: Barrett TE]] | ||
[[Category: Lomas | [[Category: Gooptu B]] | ||
[[Category: Mallya | [[Category: Lomas DA]] | ||
[[Category: Nobeli | [[Category: Mallya M]] | ||
[[Category: Phillips | [[Category: Nobeli I]] | ||
[[Category: Purkiss | [[Category: Phillips RL]] | ||
[[Category: Purkiss A]] | |||