6ay0: Difference between revisions

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OCA

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 ==Crystal structure of H108A peptidylglycine alpha-hydroxylating monooxygenase (PHM) soaked with peptide==
-<StructureSection load='6ay0' size='340' side='right' caption='[[6ay0]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
+<StructureSection load='6ay0' size='340' side='right'caption='[[6ay0]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[6ay0]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Buffalo_rat Buffalo rat]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6AY0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6AY0 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[6ay0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6AY0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6AY0 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Pam ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Buffalo rat])</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6ay0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ay0 OCA], [http://pdbe.org/6ay0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ay0 RCSB], [http://www.ebi.ac.uk/pdbsum/6ay0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ay0 ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ay0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ay0 OCA], [https://pdbe.org/6ay0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ay0 RCSB], [https://www.ebi.ac.uk/pdbsum/6ay0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ay0 ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/AMD_RAT AMD_RAT]] Bifunctional enzyme that catalyzes 2 sequential steps in C-terminal alpha-amidation of peptides. The monooxygenase part produces an unstable peptidyl(2-hydroxyglycine) intermediate that is dismutated to glyoxylate and the corresponding desglycine peptide amide by the lyase part. C-terminal amidation of peptides such as neuropeptides is essential for full biological activity.
+[https://www.uniprot.org/uniprot/AMD_RAT AMD_RAT] Bifunctional enzyme that catalyzes 2 sequential steps in C-terminal alpha-amidation of peptides. The monooxygenase part produces an unstable peptidyl(2-hydroxyglycine) intermediate that is dismutated to glyoxylate and the corresponding desglycine peptide amide by the lyase part. C-terminal amidation of peptides such as neuropeptides is essential for full biological activity.
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 21: / Line 21: @@
 ==See Also==
-*[[Monooxygenase|Monooxygenase]]
+*[[Monooxygenase 3D structures|Monooxygenase 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Buffalo rat]]
+[[Category: Large Structures]]
-[[Category: Amzel, L M]]
+[[Category: Rattus norvegicus]]
-[[Category: Gabelli, S B]]
+[[Category: Amzel LM]]
-[[Category: Maheshwari, S]]
+[[Category: Gabelli SB]]
-[[Category: Rudzka, K]]
+[[Category: Maheshwari S]]
-[[Category: Oxidoreductase]]
+[[Category: Rudzka K]]
-[[Category: Peptidylglycine 2-hydroxylase]]
-[[Category: Peptidylglycine monooxygenase]]
-[[Category: Phm]]