2yce: Difference between revisions

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 ==Structure of an Archaeal fructose-1,6-bisphosphate aldolase with the catalytic Lys covalently bound to the carbinolamine intermediate of the substrate.==
-<StructureSection load='2yce' size='340' side='right' caption='[[2yce]], [[Resolution|resolution]] 1.93&Aring;' scene=''>
+<StructureSection load='2yce' size='340' side='right'caption='[[2yce]], [[Resolution|resolution]] 1.93&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2yce]] is a 10 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_35583 Atcc 35583]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1w8r 1w8r]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YCE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YCE FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2yce]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoproteus_tenax Thermoproteus tenax]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1w8r 1w8r]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YCE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YCE FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=M2P:D-MANNITOL-1,6-DIPHOSPHATE'>M2P</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.93&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ok4|1ok4]], [[1ojx|1ojx]], [[1ok6|1ok6]], [[1w8s|1w8s]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=M2P:D-MANNITOL-1,6-DIPHOSPHATE'>M2P</scene></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Fructose-bisphosphate_aldolase Fructose-bisphosphate aldolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.2.13 4.1.2.13] </span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yce FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yce OCA], [https://pdbe.org/2yce PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yce RCSB], [https://www.ebi.ac.uk/pdbsum/2yce PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yce ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2yce FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yce OCA], [http://pdbe.org/2yce PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2yce RCSB], [http://www.ebi.ac.uk/pdbsum/2yce PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2yce ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/ALF1_THETK ALF1_THETK]] Catalyzes the reversible cleavage of fructose 1,6-bisphosphate (FBP) to glyceraldehyde 3-phosphate (GAP) and dihydroxyacetone phosphate (DHAP).
+[https://www.uniprot.org/uniprot/ALF1_THETK ALF1_THETK] Catalyzes the reversible cleavage of fructose 1,6-bisphosphate (FBP) to glyceraldehyde 3-phosphate (GAP) and dihydroxyacetone phosphate (DHAP).
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 22: / Line 21: @@
 ==See Also==
-*[[Aldolase|Aldolase]]
+*[[Aldolase 3D structures|Aldolase 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Atcc 35583]]
+[[Category: Large Structures]]
-[[Category: Fructose-bisphosphate aldolase]]
+[[Category: Thermoproteus tenax]]
-[[Category: Hensel, R]]
+[[Category: Hensel R]]
-[[Category: Lorentzen, E]]
+[[Category: Lorentzen E]]
-[[Category: Pohl, E]]
+[[Category: Pohl E]]
-[[Category: Siebers, B]]
+[[Category: Siebers B]]
-[[Category: Glycolysis]]
-[[Category: Lyase]]