2xfd: Difference between revisions
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==vCBM60 in complex with cellobiose== | ==vCBM60 in complex with cellobiose== | ||
<StructureSection load='2xfd' size='340' side='right' caption='[[2xfd]], [[Resolution|resolution]] 1.19Å' scene=''> | <StructureSection load='2xfd' size='340' side='right'caption='[[2xfd]], [[Resolution|resolution]] 1.19Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2xfd]] is a 1 chain structure with sequence from [ | <table><tr><td colspan='2'>[[2xfd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XFD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XFD FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand= | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.19Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PRD_900005:beta-cellobiose'>PRD_900005</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xfd OCA], [https://pdbe.org/2xfd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xfd RCSB], [https://www.ebi.ac.uk/pdbsum/2xfd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xfd ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/D7GNB4_9BACT D7GNB4_9BACT] | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xf/2xfd_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xf/2xfd_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Escherichia coli]] | [[Category: Escherichia coli]] | ||
[[Category: Bolam | [[Category: Large Structures]] | ||
[[Category: Davies | [[Category: Bolam DN]] | ||
[[Category: Flint | [[Category: Davies GJ]] | ||
[[Category: Gilbert | [[Category: Flint JE]] | ||
[[Category: Liu | [[Category: Gilbert HJ]] | ||
[[Category: Montanier | [[Category: Liu Z]] | ||
[[Category: Nurizzo | [[Category: Montanier C]] | ||
[[Category: Roberts | [[Category: Nurizzo D]] | ||
[[Category: Rogowski | [[Category: Roberts SM]] | ||
[[Category: Turkenburg | [[Category: Rogowski A]] | ||
[[Category: Weiner | [[Category: Turkenburg JP]] | ||
[[Category: Xie | [[Category: Weiner DP]] | ||
[[Category: Xie H]] | |||