2qmm: Difference between revisions

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OCA

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 ==Crystal structure of APC86534.1 (C-terminal domain of NCBI AAB90184.1; Pfam BIG 123.1)==
-<StructureSection load='2qmm' size='340' side='right' caption='[[2qmm]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
+<StructureSection load='2qmm' size='340' side='right'caption='[[2qmm]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2qmm]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Arcfu Arcfu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QMM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2QMM FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2qmm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus_DSM_4304 Archaeoglobus fulgidus DSM 4304]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QMM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QMM FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AF_1056 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224325 ARCFU])</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qmm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qmm OCA], [http://pdbe.org/2qmm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2qmm RCSB], [http://www.ebi.ac.uk/pdbsum/2qmm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2qmm ProSAT], [http://www.topsan.org/Proteins/MCSG/2qmm TOPSAN]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qmm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qmm OCA], [https://pdbe.org/2qmm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qmm RCSB], [https://www.ebi.ac.uk/pdbsum/2qmm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qmm ProSAT], [https://www.topsan.org/Proteins/MCSG/2qmm TOPSAN]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/TRMY_ARCFU TRMY_ARCFU]] Specifically catalyzes the N1-methylation of pseudouridine at position 54 (Psi54) in tRNAs.
+[https://www.uniprot.org/uniprot/TRMY_ARCFU TRMY_ARCFU] Specifically catalyzes the N1-methylation of pseudouridine at position 54 (Psi54) in tRNAs.
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
@@ Line 22: / Line 22: @@
 __TOC__
 </StructureSection>
-[[Category: Arcfu]]
+[[Category: Archaeoglobus fulgidus DSM 4304]]
-[[Category: Duke, N]]
+[[Category: Large Structures]]
-[[Category: Gu, M]]
+[[Category: Duke N]]
-[[Category: Joachimiak, A]]
+[[Category: Gu M]]
-[[Category: Structural genomic]]
+[[Category: Joachimiak A]]
-[[Category: Zhou, M]]
+[[Category: Zhou M]]
-[[Category: Alpha/beta knot]]
-[[Category: Mcsg]]
-[[Category: PSI, Protein structure initiative]]
-[[Category: Sam]]
-[[Category: Unknown function]]