2phc: Difference between revisions

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[[Image:2phc.jpg|left|200px]]


{{Structure
==Crystal structure of conserved uncharacterized protein PH0987 from Pyrococcus horikoshii==
|PDB= 2phc |SIZE=350|CAPTION= <scene name='initialview01'>2phc</scene>, resolution 2.290&Aring;
<StructureSection load='2phc' size='340' side='right'caption='[[2phc]], [[Resolution|resolution]] 2.29&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND=  
<table><tr><td colspan='2'>[[2phc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PHC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PHC FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.29&#8491;</td></tr>
|GENE= PH0987 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=53953 Pyrococcus horikoshii])
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2phc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2phc OCA], [https://pdbe.org/2phc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2phc RCSB], [https://www.ebi.ac.uk/pdbsum/2phc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2phc ProSAT], [https://www.topsan.org/Proteins/RSGI/2phc TOPSAN]</span></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02682 AHS1]</span>
</table>
|RELATEDENTRY=
== Function ==
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2phc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2phc OCA], [http://www.ebi.ac.uk/pdbsum/2phc PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2phc RCSB]</span>
[https://www.uniprot.org/uniprot/O58715_PYRHO O58715_PYRHO]
}}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
'''Crystal structure of conserved uncharacterized protein PH0987 from Pyrococcus horikoshii'''
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ph/2phc_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
2PHC is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PHC OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Pyrococcus horikoshii]]
  </jmolCheckbox>
[[Category: Single protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2phc ConSurf].
[[Category: Chen, L.]]
<div style="clear:both"></div>
[[Category: Chrzas, J.]]
__TOC__
[[Category: Ebihara, A.]]
</StructureSection>
[[Category: Fu, Z-Q.]]
[[Category: Large Structures]]
[[Category: II, J T.Swindell.]]
[[Category: Pyrococcus horikoshii OT3]]
[[Category: Kuramitsu, S.]]
[[Category: Chen L]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Chrzas J]]
[[Category: Rose, J P.]]
[[Category: Ebihara A]]
[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
[[Category: Fu Z-Q]]
[[Category: Shinkai, A.]]
[[Category: Kuramitsu S]]
[[Category: Wang, B-C.]]
[[Category: Rose JP]]
[[Category: Yokoyama, S.]]
[[Category: Shinkai A]]
[[Category: Zhu, J.]]
[[Category: Swindell II JT]]
[[Category: ph0730]]
[[Category: Wang B-C]]
[[Category: protein structure initiative]]
[[Category: Yokoyama S]]
[[Category: psi]]
[[Category: Zhu J]]
[[Category: pyrococcus horikoshii]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: rsgi]]
[[Category: secsg]]
[[Category: southeast collaboratory for structural genomic]]
[[Category: structural genomic]]
[[Category: x-ray diffraction]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:35:52 2008''

Latest revision as of 12:09, 21 February 2024

Crystal structure of conserved uncharacterized protein PH0987 from Pyrococcus horikoshiiCrystal structure of conserved uncharacterized protein PH0987 from Pyrococcus horikoshii

Structural highlights

2phc is a 1 chain structure with sequence from Pyrococcus horikoshii OT3. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.29Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

O58715_PYRHO

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2phc, resolution 2.29Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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