2oy9: Difference between revisions

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[[Image:2oy9.gif|left|200px]]


{{Structure
==Crystal structure of an unknown conserved protein- Pfam: UPF0223==
|PDB= 2oy9 |SIZE=350|CAPTION= <scene name='initialview01'>2oy9</scene>, resolution 1.60&Aring;
<StructureSection load='2oy9' size='340' side='right'caption='[[2oy9]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OY9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OY9 FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
|GENE= BH2638 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=86665 Bacillus halodurans])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam05256 UPF0223]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oy9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oy9 OCA], [https://pdbe.org/2oy9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oy9 RCSB], [https://www.ebi.ac.uk/pdbsum/2oy9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oy9 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2oy9 TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2oy9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oy9 OCA], [http://www.ebi.ac.uk/pdbsum/2oy9 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2oy9 RCSB]</span>
== Evolutionary Conservation ==
}}
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
'''Crystal structure of an unknown conserved protein- Pfam: UPF0223'''
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oy/2oy9_consurf.spt"</scriptWhenChecked>
 
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
==About this Structure==
    <text>to colour the structure by Evolutionary Conservation</text>
2OY9 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_halodurans Bacillus halodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OY9 OCA].  
  </jmolCheckbox>
[[Category: Bacillus halodurans]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2oy9 ConSurf].
[[Category: Single protein]]
<div style="clear:both"></div>
[[Category: Burley, S K.]]
__TOC__
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
</StructureSection>
[[Category: Sugadev, R.]]
[[Category: Large Structures]]
[[Category: Swaminathan, S.]]
[[Category: Burley SK]]
[[Category: 10286b]]
[[Category: Sugadev R]]
[[Category: new york structural genomix research consortium]]
[[Category: Swaminathan S]]
[[Category: nysgxrc]]
[[Category: pfam]]
[[Category: protein structure initiative]]
[[Category: psi-2]]
[[Category: structural genomic]]
[[Category: upf0223]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:25:03 2008''

Latest revision as of 11:26, 30 October 2024

Crystal structure of an unknown conserved protein- Pfam: UPF0223Crystal structure of an unknown conserved protein- Pfam: UPF0223

Structural highlights

Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.6Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2oy9, resolution 1.60Å

Drag the structure with the mouse to rotate

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OCA
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