2bj9: Difference between revisions

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OCA

@@ Line 1: / Line 1: @@
 ==NIKR with bound NICKEL and phosphate==
-<StructureSection load='2bj9' size='340' side='right' caption='[[2bj9]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
+<StructureSection load='2bj9' size='340' side='right'caption='[[2bj9]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2bj9]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BJ9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BJ9 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2bj9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BJ9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BJ9 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1q5v|1q5v]], [[1q5y|1q5y]], [[2bj1|2bj1]], [[2bj3|2bj3]], [[2bj7|2bj7]], [[2bj8|2bj8]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bj9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bj9 OCA], [http://pdbe.org/2bj9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2bj9 RCSB], [http://www.ebi.ac.uk/pdbsum/2bj9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2bj9 ProSAT], [http://www.topsan.org/Proteins/RSGI/2bj9 TOPSAN]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bj9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bj9 OCA], [https://pdbe.org/2bj9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bj9 RCSB], [https://www.ebi.ac.uk/pdbsum/2bj9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bj9 ProSAT], [https://www.topsan.org/Proteins/RSGI/2bj9 TOPSAN]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/NIKR_PYRHO NIKR_PYRHO]] Transcriptional regulator (Potential).
+[https://www.uniprot.org/uniprot/NIKR_PYRHO NIKR_PYRHO] Transcriptional regulator (Potential).
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
@@ Line 33: / Line 33: @@
 __TOC__
 </StructureSection>
-[[Category: Pyrococcus horikoshii]]
+[[Category: Large Structures]]
-[[Category: Chivers, P T]]
+[[Category: Pyrococcus horikoshii OT3]]
-[[Category: Tahirov, T H]]
+[[Category: Chivers PT]]
-[[Category: Dna-binding]]
+[[Category: Tahirov TH]]
-[[Category: Metal-binding]]
-[[Category: Nickel]]
-[[Category: Nikr]]
-[[Category: Repressor]]
-[[Category: Structural genomic]]
-[[Category: Rsgi]]
-[[Category: Transcription]]
-[[Category: Transcription regulation]]