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==The crystal structure of the ywmB protein from Bacillus subtilis==
==The crystal structure of the ywmB protein from Bacillus subtilis==
<StructureSection load='2fpn' size='340' side='right' caption='[[2fpn]], [[Resolution|resolution]] 2.49&Aring;' scene=''>
<StructureSection load='2fpn' size='340' side='right'caption='[[2fpn]], [[Resolution|resolution]] 2.49&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2fpn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FPN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FPN FirstGlance]. <br>
<table><tr><td colspan='2'>[[2fpn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FPN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FPN FirstGlance]. <br>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.49&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ywmB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Vibrio subtilis" Ehrenberg 1835])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fpn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fpn OCA], [http://pdbe.org/2fpn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2fpn RCSB], [http://www.ebi.ac.uk/pdbsum/2fpn PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2fpn ProSAT], [http://www.topsan.org/Proteins/MCSG/2fpn TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fpn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fpn OCA], [https://pdbe.org/2fpn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fpn RCSB], [https://www.ebi.ac.uk/pdbsum/2fpn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fpn ProSAT], [https://www.topsan.org/Proteins/MCSG/2fpn TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/YWMB_BACSU YWMB_BACSU]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fp/2fpn_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fp/2fpn_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Vibrio subtilis ehrenberg 1835]]
[[Category: Bacillus subtilis]]
[[Category: Joachimiak, A]]
[[Category: Large Structures]]
[[Category: Structural genomic]]
[[Category: Joachimiak A]]
[[Category: Moy, S]]
[[Category: Moy S]]
[[Category: Wu, R]]
[[Category: Wu R]]
[[Category: Zhang, R]]
[[Category: Zhang R]]
[[Category: Bacillus subtili]]
[[Category: Domain swapping]]
[[Category: Mcsg]]
[[Category: PSI, Protein structure initiative]]
[[Category: Structural genomoc]]
[[Category: Unknown function]]
[[Category: Ywmb]]

Latest revision as of 08:13, 17 October 2024

The crystal structure of the ywmB protein from Bacillus subtilisThe crystal structure of the ywmB protein from Bacillus subtilis

Structural highlights

2fpn is a 1 chain structure with sequence from Bacillus subtilis. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.49Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

YWMB_BACSU

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2fpn, resolution 2.49Å

Drag the structure with the mouse to rotate

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OCA