2i3f: Difference between revisions

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OCA

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-[[Image:2i3f.gif|left|200px]]
- {{Structure
+==Crystal Structure of a Glycolipid transfer-like protein from Galdieria sulphuraria==
-|PDB= 2i3f |SIZE=350|CAPTION= <scene name='initialview01'>2i3f</scene>, resolution 1.380&Aring;
+<StructureSection load='2i3f' size='340' side='right'caption='[[2i3f]], [[Resolution|resolution]] 1.38&Aring;' scene=''>
-|SITE=
+== Structural highlights ==
-|LIGAND=
+<table><tr><td colspan='2'>[[2i3f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Galdieria_sulphuraria Galdieria sulphuraria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I3F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2I3F FirstGlance]. <br>
-|ACTIVITY=
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.38&#8491;</td></tr>
-|GENE= c503_101305g25.t1 (MSU_Galdi) ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=130081 Galdieria sulphuraria])
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2i3f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i3f OCA], [https://pdbe.org/2i3f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2i3f RCSB], [https://www.ebi.ac.uk/pdbsum/2i3f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2i3f ProSAT], [https://www.topsan.org/Proteins/CESG/2i3f TOPSAN]</span></td></tr>
-|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam08718 GLTP]</span>
+</table>
-|RELATEDENTRY=
+== Evolutionary Conservation ==
-|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2i3f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i3f OCA], [http://www.ebi.ac.uk/pdbsum/2i3f PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2i3f RCSB]</span>
+[[Image:Consurf_key_small.gif|200px|right]]
-}}
+Check<jmol>
+  <jmolCheckbox>
-'''Crystal Structure of a Glycolipid transfer-like protein from Galdieria sulphuraria'''
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i3/2i3f_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
-==About this Structure==
+  </jmolCheckbox>
-I3F is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Galdieria_sulphuraria Galdieria sulphuraria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I3F OCA].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2i3f ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
 [[Category: Galdieria sulphuraria]]
-[[Category: Protein complex]]
+[[Category: Large Structures]]
-[[Category: Bingman, C A.]]
+[[Category: Bingman CA]]
-[[Category: Bitto, E.]]
+[[Category: Bitto E]]
-[[Category: CESG, Center for Eukaryotic Structural Genomics.]]
+[[Category: McCoy JG]]
-[[Category: Jr., G N.Phillips.]]
+[[Category: Phillips Jr GN]]
-[[Category: McCoy, J G.]]
+[[Category: Wesenberg GE]]
-[[Category: Wesenberg, G E.]]
-[[Category: center for eukaryotic structural genomic]]
-[[Category: cesg]]
-[[Category: gltp superfamily]]
-[[Category: gltp-like]]
-[[Category: protein structure initiative]]
-[[Category: psi]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:39:10 2008''