6d7k: Difference between revisions
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==Complex structure of Methane monooxygenase hydroxylase in complex with inhibitory subunit== | |||
<StructureSection load='6d7k' size='340' side='right'caption='[[6d7k]], [[Resolution|resolution]] 2.60Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[6d7k]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Methylosinus_sporium Methylosinus sporium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6D7K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6D7K FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=HEZ:HEXANE-1,6-DIOL'>HEZ</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6d7k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6d7k OCA], [https://pdbe.org/6d7k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6d7k RCSB], [https://www.ebi.ac.uk/pdbsum/6d7k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6d7k ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/Q27RN6_METSR Q27RN6_METSR] | |||
<div style="background-color:#fffaf0;"> | |||
== Publication Abstract from PubMed == | |||
Soluble methane monooxygenase in methanotrophs converts methane to methanol under ambient conditions. The maximum catalytic activity of hydroxylase (MMOH) is achieved through the interplay of its regulatory protein (MMOB) and reductase. An additional auxiliary protein, MMOD, functions as an inhibitor of MMOH; however, its inhibitory mechanism remains unknown. Here, we report the crystal structure of the MMOH-MMOD complex from Methylosinus sporium strain 5 (2.6 A). Its structure illustrates that MMOD associates with the canyon region of MMOH where MMOB binds. Although MMOD and MMOB recognize the same binding site, each binding component triggers different conformational changes toward MMOH, which then respectively lead to the inhibition and activation of MMOH. Particularly, MMOD binding perturbs the di-iron geometry by inducing two major MMOH conformational changes, i.e., MMOH beta subunit disorganization and subsequent His(147) dissociation with Fe1 coordination. Furthermore, 1,6-hexanediol, a mimic of the products of sMMO, reveals the substrate access route. | |||
MMOD-induced structural changes of hydroxylase in soluble methane monooxygenase.,Kim H, An S, Park YR, Jang H, Yoo H, Park SH, Lee SJ, Cho US Sci Adv. 2019 Oct 2;5(10):eaax0059. doi: 10.1126/sciadv.aax0059. eCollection 2019, Oct. PMID:31616787<ref>PMID:31616787</ref> | |||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |||
[[Category: | </div> | ||
[[Category: | <div class="pdbe-citations 6d7k" style="background-color:#fffaf0;"></div> | ||
[[Category: | |||
[[Category: | ==See Also== | ||
*[[Methane monooxygenase 3D structures|Methane monooxygenase 3D structures]] | |||
== References == | |||
<references/> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Methylosinus sporium]] | |||
[[Category: Cho U-S]] | |||
[[Category: Kim H]] | |||
[[Category: Lee SJ]] | |||
Latest revision as of 18:19, 4 October 2023
Complex structure of Methane monooxygenase hydroxylase in complex with inhibitory subunitComplex structure of Methane monooxygenase hydroxylase in complex with inhibitory subunit
Structural highlights
FunctionPublication Abstract from PubMedSoluble methane monooxygenase in methanotrophs converts methane to methanol under ambient conditions. The maximum catalytic activity of hydroxylase (MMOH) is achieved through the interplay of its regulatory protein (MMOB) and reductase. An additional auxiliary protein, MMOD, functions as an inhibitor of MMOH; however, its inhibitory mechanism remains unknown. Here, we report the crystal structure of the MMOH-MMOD complex from Methylosinus sporium strain 5 (2.6 A). Its structure illustrates that MMOD associates with the canyon region of MMOH where MMOB binds. Although MMOD and MMOB recognize the same binding site, each binding component triggers different conformational changes toward MMOH, which then respectively lead to the inhibition and activation of MMOH. Particularly, MMOD binding perturbs the di-iron geometry by inducing two major MMOH conformational changes, i.e., MMOH beta subunit disorganization and subsequent His(147) dissociation with Fe1 coordination. Furthermore, 1,6-hexanediol, a mimic of the products of sMMO, reveals the substrate access route. MMOD-induced structural changes of hydroxylase in soluble methane monooxygenase.,Kim H, An S, Park YR, Jang H, Yoo H, Park SH, Lee SJ, Cho US Sci Adv. 2019 Oct 2;5(10):eaax0059. doi: 10.1126/sciadv.aax0059. eCollection 2019, Oct. PMID:31616787[1] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. See AlsoReferences
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