1vdc: Difference between revisions

No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:


==STRUCTURE OF NADPH DEPENDENT THIOREDOXIN REDUCTASE==
==STRUCTURE OF NADPH DEPENDENT THIOREDOXIN REDUCTASE==
<StructureSection load='1vdc' size='340' side='right' caption='[[1vdc]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
<StructureSection load='1vdc' size='340' side='right'caption='[[1vdc]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1vdc]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VDC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VDC FirstGlance]. <br>
<table><tr><td colspan='2'>[[1vdc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VDC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VDC FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ATTHIREDB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Thioredoxin-disulfide_reductase Thioredoxin-disulfide reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.1.9 1.8.1.9] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vdc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vdc OCA], [https://pdbe.org/1vdc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vdc RCSB], [https://www.ebi.ac.uk/pdbsum/1vdc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vdc ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vdc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vdc OCA], [http://pdbe.org/1vdc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1vdc RCSB], [http://www.ebi.ac.uk/pdbsum/1vdc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1vdc ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/TRXB1_ARATH TRXB1_ARATH]] Possesses thioredoxin-disulfide reductase activity towards thioredoxins O1, O2 and F3.<ref>PMID:11717467</ref>
[https://www.uniprot.org/uniprot/TRXB1_ARATH TRXB1_ARATH] Possesses thioredoxin-disulfide reductase activity towards thioredoxins O1, O2 and F3.<ref>PMID:11717467</ref>  
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 16: Line 15:
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vd/1vdc_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vd/1vdc_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
Line 32: Line 31:


==See Also==
==See Also==
*[[Thioredoxin Reductase|Thioredoxin Reductase]]
*[[Thioredoxin reductase 3D structures|Thioredoxin reductase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Arath]]
[[Category: Arabidopsis thaliana]]
[[Category: Thioredoxin-disulfide reductase]]
[[Category: Large Structures]]
[[Category: Dai, S]]
[[Category: Dai S]]
[[Category: Eklund, H]]
[[Category: Eklund H]]
[[Category: Disulfide oxidoreductase]]
[[Category: Flavin adenine dinuleotide]]
[[Category: Hypothetical protein]]
[[Category: Oxidoreductase]]
[[Category: Redox-active center]]
[[Category: Thioredoxin reductase]]

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA